RPSBLAST alignment of GI: 254781179 and protein with PDBid: 2fb9

>2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A* Length = 322
 Score =  157 bits (397), Expect = 3e-39
 Identities = 95/318 (29%), Positives = 152/318 (47%), Gaps = 27/318 (8%)

Query: 2   AVLMGGISSEREVSLSSGKACASALEDAGFKV---------------------SQIDVDR 40
            ++ GG+S E EVSL S +     +                            +  + + 
Sbjct: 7   LLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAVIAQDGRWLLGEKALTALEAKAAPEGEH 66

Query: 41  SVGLVLAHLKPDLAFNVLHGNFGEDGLVQAILELLEIPYTHSGILASALSMDKMRSKQVV 100
                L+  + D+ F +LHG FGEDG VQ  LELL  PY  +G+ ASAL MDK  SK+V+
Sbjct: 67  PFPPPLSWERYDVVFPLLHGRFGEDGTVQGFLELLGKPYVGAGVAASALCMDKDLSKRVL 126

Query: 101 SSCGVPVCPSILVNRFTMDSQHLISPPYVIKPLKGGSSLGIIVIKKDQSIPLDLLQSSSW 160
           +  GVPV P +   R          PP+ +KP   GSS+GI  +++ Q +    L  +  
Sbjct: 127 AQAGVPVVPWV-AVRKGEPPVVPFDPPFFVKPANTGSSVGISRVERFQDLE-AALALAFR 184

Query: 161 NHGDQLLIEQYVDGIELTCGVMGDASLDVTEIAV--PKSDFYSYELKYSSLNSTHVLPAK 218
                ++ +      EL  GV+G+   + + +     ++ FY YE KY+   +  ++PA 
Sbjct: 185 YDEKAVVEKALSPVRELEVGVLGNVFGEASPVGEVRYEAPFYDYETKYTPGRAELLIPAP 244

Query: 219 IPLDIYKEVQRLAFLAHQAIGCRGISRSDFLFDPLSRKVFWLEINVQPGMTPVSIFPEMA 278
           +     + VQ LA  A++ +G RG++R DF       +++  E+N  PG TP S++P + 
Sbjct: 245 LDPGTQETVQELALKAYKVLGVRGMARVDFFLA--EGELYLNELNTIPGFTPTSMYPRLF 302

Query: 279 AYAGYSFRELLLWMVEDA 296
              G ++ ELL  +VE A
Sbjct: 303 EAGGVAYPELLRRLVELA 320