RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254781181|ref|YP_003065594.1| hypothetical protein
CLIBASIA_05440 [Candidatus Liberibacter asiaticus str. psy62]
         (85 letters)



>d1hm6a_ a.65.1.1 (A:) Annexin I {Pig (Sus scrofa) [TaxId: 9823]}
          Length = 343

 Score = 28.0 bits (62), Expect = 0.23
 Identities = 5/21 (23%), Positives = 9/21 (42%)

Query: 62 PEQRQELAKRYKEKYNDVLIH 82
            QRQ++   Y ++    L  
Sbjct: 73 NAQRQQIKAAYLQEKGKPLDE 93


>d1avca1 a.65.1.1 (A:10-350) Annexin VI {Cow (Bos taurus) [TaxId:
          9913]}
          Length = 341

 Score = 27.6 bits (61), Expect = 0.29
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query: 62 PEQRQELAKRYKEKYNDVLIH 82
           +QRQE+ + YK  Y   LI 
Sbjct: 43 NKQRQEICQNYKSLYGKDLIA 63


>d1axna_ a.65.1.1 (A:) Annexin III {Human (Homo sapiens) [TaxId:
          9606]}
          Length = 323

 Score = 27.6 bits (61), Expect = 0.33
 Identities = 7/21 (33%), Positives = 9/21 (42%)

Query: 62 PEQRQELAKRYKEKYNDVLIH 82
            QRQ + K Y+  Y   L  
Sbjct: 50 NAQRQLIVKEYQAAYGKELKD 70


>d1n00a_ a.65.1.1 (A:) Annexin GH1 {Cotton (Gossypium hirsutum)
          [TaxId: 3635]}
          Length = 318

 Score = 27.3 bits (60), Expect = 0.33
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query: 62 PEQRQELAKRYKEKYNDVLIH 82
           EQR  + K Y E Y + L+ 
Sbjct: 45 AEQRNLIRKTYAETYGEDLLK 65


>d1avca2 a.65.1.1 (A:351-671) Annexin VI {Cow (Bos taurus) [TaxId:
          9913]}
          Length = 321

 Score = 27.3 bits (60), Expect = 0.41
 Identities = 5/21 (23%), Positives = 11/21 (52%)

Query: 62 PEQRQELAKRYKEKYNDVLIH 82
            QRQ++ + +K  +   L+ 
Sbjct: 45 NAQRQQIRQTFKSHFGRDLMA 65


>d1i4aa_ a.65.1.1 (A:) Annexin IV {Cow (Bos taurus) [TaxId: 9913]}
          Length = 309

 Score = 26.9 bits (59), Expect = 0.44
 Identities = 7/21 (33%), Positives = 9/21 (42%)

Query: 62 PEQRQELAKRYKEKYNDVLIH 82
            QRQE+   YK      L+ 
Sbjct: 36 TAQRQEIRTAYKTTIGRDLMD 56


>d1w7ba_ a.65.1.1 (A:) Annexin II {Human (Homo sapiens) [TaxId:
          9606]}
          Length = 319

 Score = 26.9 bits (59), Expect = 0.49
 Identities = 7/22 (31%), Positives = 11/22 (50%)

Query: 62 PEQRQELAKRYKEKYNDVLIHL 83
           EQRQ++A  Y+ +    L   
Sbjct: 45 NEQRQDIAFAYQRRTKKELASA 66


>d2ie7a1 a.65.1.1 (A:2-319) Annexin V {Rat (Rattus norvegicus)
          [TaxId: 10116]}
          Length = 318

 Score = 26.9 bits (59), Expect = 0.50
 Identities = 6/21 (28%), Positives = 13/21 (61%)

Query: 62 PEQRQELAKRYKEKYNDVLIH 82
            QRQ++A+ +K  +   L++
Sbjct: 44 NAQRQQIAEEFKTLFGRDLVN 64


>d1dm5a_ a.65.1.1 (A:) Annexin XII {Hydra vulgaris [TaxId: 6087]}
          Length = 315

 Score = 26.1 bits (57), Expect = 0.77
 Identities = 5/21 (23%), Positives = 8/21 (38%)

Query: 62 PEQRQELAKRYKEKYNDVLIH 82
            QRQ++   Y   +   L  
Sbjct: 44 NAQRQQIKTDYTTLFGKHLED 64


>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase
           (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId:
           4081]}
          Length = 428

 Score = 23.8 bits (50), Expect = 4.6
 Identities = 6/25 (24%), Positives = 12/25 (48%)

Query: 61  YPEQRQELAKRYKEKYNDVLIHLPD 85
            PE R+ +AK  ++     +   P+
Sbjct: 85  LPEFRKAIAKFMEKTRGGRVRFDPE 109


>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131
          {Thermotoga maritima [TaxId: 2336]}
          Length = 420

 Score = 23.2 bits (48), Expect = 6.1
 Identities = 4/17 (23%), Positives = 8/17 (47%)

Query: 61 YPEQRQELAKRYKEKYN 77
           P  +Q++ K  +  Y 
Sbjct: 82 DPVLKQQILKLLERMYG 98


>d1nkta3 c.37.1.19 (A:-15-225,A:350-396) Translocation ATPase
          SecA, nucleotide-binding domains {Mycobacterium
          tuberculosis [TaxId: 1773]}
          Length = 288

 Score = 23.0 bits (49), Expect = 7.4
 Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 8/55 (14%)

Query: 28 LKRIVKVQKQAKSLANASQKLTVDQIDNSIMFLYPEQRQELAKRYKEKYNDVLIH 82
          +KR+ KV     +L++  +KLT  ++          +  E  +R  ++ N   + 
Sbjct: 30 VKRLKKVADYVGTLSDDVEKLTDAEL--------RAKTDEFKRRLADQKNPETLD 76


>d1tf5a3 c.37.1.19 (A:1-226,A:349-395) Translocation ATPase SecA,
          nucleotide-binding domains {Bacillus subtilis [TaxId:
          1423]}
          Length = 273

 Score = 23.0 bits (49), Expect = 8.1
 Identities = 7/55 (12%), Positives = 18/55 (32%), Gaps = 8/55 (14%)

Query: 28 LKRIVKVQKQAKSLANASQKLTVDQIDNSIMFLYPEQRQELAKRYKEKYNDVLIH 82
          L R  K+     ++    + L+ D +          +  E  +R ++      + 
Sbjct: 16 LNRYEKIANDIDAIRGDYENLSDDAL--------KHKTIEFKERLEKGATTDDLL 62


>d1vdma1 c.61.1.1 (A:1-153) Pprobable purine
          phosphoribosyltransferase PH0095 {Pyrococcus horikoshii
          [TaxId: 53953]}
          Length = 153

 Score = 22.5 bits (47), Expect = 9.3
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 8/34 (23%)

Query: 48 LTVDQIDNSIMFLYPEQRQELAKRYKEKYNDVLI 81
          LT  Q+D +I          LA++ +E   DV+I
Sbjct: 6  LTWWQVDRAI--------FALAEKLREYKPDVII 31


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.323    0.137    0.387 

Gapped
Lambda     K      H
   0.267   0.0655    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 293,801
Number of extensions: 10815
Number of successful extensions: 61
Number of sequences better than 10.0: 1
Number of HSP's gapped: 61
Number of HSP's successfully gapped: 24
Length of query: 85
Length of database: 2,407,596
Length adjustment: 50
Effective length of query: 35
Effective length of database: 1,721,096
Effective search space: 60238360
Effective search space used: 60238360
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 47 (22.0 bits)