HHsearch alignment for GI: 254781182 and conserved domain: PRK11448
>PRK11448 hsdR type I restriction enzyme EcoKI subunit R; Provisional.
Probab=98.90 E-value=6.9e-09 Score=72.51 Aligned_cols=66 Identities=24% Similarity=0.276 Sum_probs=61.5
Q ss_pred CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 689654488999999999868999899999999999731320688889899999999999999999
Q gi|254781182|r 8 RINFEKCGMLSDRTRYLKQHNLIIEEIFEWSNFVRIEGNKAVHEGQSSIEESDECLEFVNLFCDIV 73 (94)
Q Consensus 8 ~l~~~k~g~l~dri~~L~~~g~I~~~i~~~~~~~R~~gN~a~H~g~~~~edA~~ll~f~~~il~~~ 73 (94)
T Consensus 54 ~l~~p~~~~~~~li~~~~f~~~i~~~i~~~~~~iRk~GN~AvH~~~~~~~~A~~~L~~~f~l~~W~ 119 (1126)
T PRK11448 54 GIEEDERTTQHDLLRRLGKEGFLDDEILDVFHALRKIGNKAVHEFHGDHDDALMCLKLAFRLAVWF 119 (1126)
T ss_pred CCCCCCCCCHHHHHHCHHHHHHCCHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 899997657999865532454269899999999998681621589999899999999999999999