HHsearch alignment for GI: 254781187 and conserved domain: COG1201

>COG1201 Lhr Lhr-like helicases [General function prediction only].
Probab=96.58  E-value=0.023  Score=33.53  Aligned_cols=78  Identities=15%  Similarity=0.071  Sum_probs=60.6

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCC------CCEEEEECCCHHH
Q ss_conf             3666842899999998888751245555541124776148867889999999999997089------9779997153799
Q gi|254781187|r   46 EHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRP------GMSIICIANSETQ  119 (367)
Q Consensus        46 ~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~------~~~v~~~A~t~~Q  119 (367)
T Consensus        18 ~~~~~~t~~Q~~a~~~i~~G~------------nvLiiAPTGsGKTeAAfLpil~~l~~~~~~~~~~~i~~lYIsPLkAL   85 (814)
T COG1201          18 RKFTSLTPPQRYAIPEIHSGE------------NVLIIAPTGSGKTEAAFLPVINELLSLGKGKLEDGIYALYISPLKAL   85 (814)
T ss_pred             HHCCCCCHHHHHHHHHHHCCC------------CEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHH
T ss_conf             850899878999999985898------------46998689997379999999999986068888885699995707888


Q ss_pred             HHHHHHHHHHHHHHHCC
Q ss_conf             99999999999998623
Q gi|254781187|r  120 LKNTLWAEVSKWLSMLP  136 (367)
Q Consensus       120 ~~~~lw~ei~k~~~~~~  136 (367)
T Consensus        86 n~Di~-~rL~~~~~~~G  101 (814)
T COG1201          86 NNDIR-RRLEEPLRELG  101 (814)
T ss_pred             HHHHH-HHHHHHHHHCC
T ss_conf             78999-99999999759