HHsearch alignment for GI: 254781187 and conserved domain: COG4889
>COG4889 Predicted helicase [General function prediction only].
Probab=94.34 E-value=0.37 Score=26.07 Aligned_cols=91 Identities=23% Similarity=0.137 Sum_probs=60.1
Q ss_pred CCCCCHHHHHHHHHC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 012598888554301-4668884436668428999999988887512455555411247761488678899999999999
Q gi|254781187|r 23 ECVLSFKNFVMRFFP-WGIKGKPLEHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWL 101 (367)
Q Consensus 23 ~~~~~~~~f~~~~~~-w~~~~~~~~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~ 101 (367)
T Consensus 134 ei~es~IDW~~f-~p~e~~~nl~l~~~kk~R~hQq~Aid~a~~~F~~n~------RGkLIMA--cGTGKTfTsLkisEal 204 (1518)
T COG4889 134 EIAESPIDWDIF-DPTELQDNLPLKKPKKPRPHQQTAIDAAKEGFSDND------RGKLIMA--CGTGKTFTSLKISEAL 204 (1518)
T ss_pred HHHCCCCCHHHC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC------CCCEEEE--CCCCCCCHHHHHHHHH
T ss_conf 873288775434-953266565647878998367899999986255166------7758983--3788621378899998
Q ss_pred HHHCCCCEEEEECCCHHHHHHHHHHH
Q ss_conf 97089977999715379999999999
Q gi|254781187|r 102 ISTRPGMSIICIANSETQLKNTLWAE 127 (367)
Q Consensus 102 ~~~~~~~~v~~~A~t~~Q~~~~lw~e 127 (367)
T Consensus 205 a~----~~iL~LvPSIsLLsQTl-re 225 (1518)
T COG4889 205 AA----ARILFLVPSISLLSQTL-RE 225 (1518)
T ss_pred HH----HHEEEECCHHHHHHHHH-HH
T ss_conf 64----02365435189999999-98