HHsearch alignment for GI: 254781187 and conserved domain: KOG0334

Probab=93.03  E-value=0.45  Score=25.57  Aligned_cols=75  Identities=24%  Similarity=0.252  Sum_probs=47.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH-HHHCC-----CCEEEEECCCHHHHH
Q ss_conf             668428999999988887512455555411247761488678899999999999-97089-----977999715379999
Q gi|254781187|r   48 FSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWL-ISTRP-----GMSIICIANSETQLK  121 (367)
Q Consensus        48 ~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~-~~~~~-----~~~v~~~A~t~~Q~~  121 (367)
T Consensus       385 y~k~~~IQ~qAiP~ImsG------------rdvIgvakTgSGKT~af~LPmirhi~dQr~~~~gdGPi~li~aPtrela~  452 (997)
T KOG0334         385 YEKPTPIQAQAIPAIMSG------------RDVIGVAKTGSGKTLAFLLPMIRHIKDQRPLEEGDGPIALILAPTRELAM  452 (997)
T ss_pred             CCCCCCHHHHHCCHHCCC------------CCEEEEECCCCCCCHHHHHHHHHHHCCCCCHHCCCCCEEEEECCCHHHHH
T ss_conf             899875566430122257------------74587732688620344211555420479711078864799737778999


Q ss_pred             HHHHHHHHHHHHHC
Q ss_conf             99999999999862
Q gi|254781187|r  122 NTLWAEVSKWLSML  135 (367)
Q Consensus       122 ~~lw~ei~k~~~~~  135 (367)
T Consensus       453 QI-~r~~~kf~k~l  465 (997)
T KOG0334         453 QI-HREVRKFLKLL  465 (997)
T ss_pred             HH-HHHHHHHHHHC
T ss_conf             99-99999987741