HHsearch alignment for GI: 254781187 and conserved domain: PRK02362
>PRK02362 ski2-like helicase; Provisional.
Probab=98.19 E-value=8.7e-05 Score=48.31 Aligned_cols=158 Identities=16% Similarity=0.032 Sum_probs=83.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH
Q ss_conf 66684289999999888875124555554112477614886788999999999999708997799971537999999999
Q gi|254781187|r 47 HFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWA 126 (367)
Q Consensus 47 ~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ 126 (367)
T Consensus 20 gI~~Lyp~Q~eal~~---gl~~g~--------NlvvsaPTgsGKTlvAElail~~l~--~g~k~vYi~P~kALa~EK~-~ 85 (736)
T PRK02362 20 GIEELYPPQAEAVEA---GLLEGK--------NLLAAIPTASGKTLLAELAMLKAIA--EGGKALYIVPLRALASEKF-E 85 (736)
T ss_pred CCCCCCHHHHHHHHH---HHCCCC--------CEEEECCCCCCHHHHHHHHHHHHHH--HCCEEEEECCHHHHHHHHH-H
T ss_conf 997578999999986---435698--------1899799998589999999999998--3997999858799999999-9
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC------CCCCCEEEEECC
Q ss_conf 99999986231211233332100012333221111345776126621013544556521011------358628999754
Q gi|254781187|r 127 EVSKWLSMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPH------NTHGMAVFNDEA 200 (367)
Q Consensus 127 ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h------~~~~~l~ivDEA 200 (367)
T Consensus 86 ~~~~~~~~gi~------------V~~~tGd~~~~~~~l~~~d-IiV~T------~EK~dsl~r~~~~~l~~v~lVViDEi 146 (736)
T PRK02362 86 EFSEFSELGLR------------VGISTGDYDRRDEYLGRND-IIVAT------SEKTDSLLRNGAPWIDDISCVVADEV 146 (736)
T ss_pred HHHHHHCCCCE------------EEEEECCCCCCHHHCCCCC-EEEEC------HHHHHHHHHCCCHHHHCCCEEEEECC
T ss_conf 99987457998------------9998089887831436899-99999------79999998448167650898998176
Q ss_pred CCCCH----HHHHHHHHHHHCCCCCEEEEEEECCCCCCCHH
Q ss_conf 55998----89999898740698825899980789998768
Q gi|254781187|r 201 SGTPD----IINKSILGFFTELNPNRFWIMTSNTRRLNGWF 237 (367)
Q Consensus 201 sgI~d----~i~e~i~g~Lt~~~~~~~~i~igNP~r~~g~F 237 (367)
T Consensus 147 Hli~d~~RG~~lE~~lskl~~~~~~iqiIgLSATl~N~~~l 187 (736)
T PRK02362 147 HLIDSPNRGPTLEVTLAKLRRLNPDMQVIALSATIGNADEL 187 (736)
T ss_pred EEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH
T ss_conf 78668872499999999997338774389862455899999