HHsearch alignment for GI: 254781187 and conserved domain: PRK04914

>PRK04914 ATP-dependent helicase HepA; Validated.
Probab=97.30  E-value=0.013  Score=34.97  Aligned_cols=176  Identities=13%  Similarity=0.134  Sum_probs=90.4

Q ss_pred             CCCCCCCCCCCCH----HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             6888443666842----899999998888751245555541124776148867889999999999997089977999715
Q gi|254781187|r   40 IKGKPLEHFSQPH----RWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIAN  115 (367)
Q Consensus        40 ~~~~~~~~~~~p~----~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~  115 (367)
T Consensus       137 ~~~~~~~gl~g~r~~l~pHQ~~ia~~v~~r-------~~---PRvLLADEVGLGKTIEAGLIl~ell~rgra~RvLIvvP  206 (955)
T PRK04914        137 QFQSPLRGLRGARAGLIPHQLYIAHEVGRR-------HA---PRVLLADEVGLGKTIEAGLIIHQQLLTGRAERVLIIVP  206 (955)
T ss_pred             HHCCCCCCCCCCCCCCCCHHHHHHHHHHHC-------CC---CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf             726951132233246563799999999714-------58---84897058888689999999999997487777999927


Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             37999999999999999862312112333321000123332211113457761266210135445565210113586289
Q gi|254781187|r  116 SETQLKNTLWAEVSKWLSMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAV  195 (367)
Q Consensus       116 t~~Q~~~~lw~ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~  195 (367)
T Consensus       207 ~~--L~~QW~~EL~~KF~L~-----f~i~D~~r~~~~~~~~~----NpF~~~~~vI~Sld~l~~~~~~~e~l~~a~WDLV  275 (955)
T PRK04914        207 ET--LQHQWLVEMLRRFNLR-----FSLFDEERCAEAQADAD----NPFETEQLVICSLDFLRKNKKRLEQALDAEWDLL  275 (955)
T ss_pred             HH--HHHHHHHHHHHHCCCC-----CEEECCHHHHHHHCCCC----CCCCCCCEEEEEHHHHCCCHHHHHHHHCCCCCEE
T ss_conf             79--9899999999983998-----09955188887533579----9754589799878996039678998733898889


Q ss_pred             EEECCCCC------CHHHHHHHHHHHHCCCCCEEEEEEECCCC--CCCHHH
Q ss_conf             99754559------98899998987406988258999807899--987688
Q gi|254781187|r  196 FNDEASGT------PDIINKSILGFFTELNPNRFWIMTSNTRR--LNGWFY  238 (367)
Q Consensus       196 ivDEAsgI------~d~i~e~i~g~Lt~~~~~~~~i~igNP~r--~~g~Fy  238 (367)
T Consensus       276 IVDEAHhL~~~~~~~s~~y~lve~-La~~~-~~lLLLTATP~QlG~e~~Fa  324 (955)
T PRK04914        276 VVDEAHHLVWSEEAPSREYQVVEQ-LAEVI-PGVLLLTATPEQLGQESHFA  324 (955)
T ss_pred             EEHHHHHHCCCCCCCCHHHHHHHH-HHHHC-CCEEEEECCCCCCCCHHHHH
T ss_conf             971344530588788879999999-98515-97699847998898666898