HHsearch alignment for GI: 254781187 and conserved domain: PRK05564
>PRK05564 DNA polymerase III subunit delta'; Validated.
Probab=96.73 E-value=0.036 Score=32.32 Aligned_cols=121 Identities=12% Similarity=0.067 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC---EEEEECCCHHHHHHHHHHHHHH
Q ss_conf 9999999888875124555554112477614886788999999999999708997---7999715379999999999999
Q gi|254781187|r 54 WQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGM---SIICIANSETQLKNTLWAEVSK 130 (367)
Q Consensus 54 wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~---~v~~~A~t~~Q~~~~lw~ei~k 130 (367)
T Consensus 8 Gq~~i~~~L~~~i~~~rl-~HA----yLF~Gp~G~GK~~~A~~~A~~ll~~~~~~~~~D~~~~~~~~~~~--I~vd~IR~ 80 (313)
T PRK05564 8 GHENIKNRIDNSIIKGKF-SHA----SLIVGEDGIGKSILAKEIANKILGKSEQREYVDIIEYKPINKKS--IGVDDIRN 80 (313)
T ss_pred CHHHHHHHHHHHHHCCCC-CCE----EEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC--CCHHHHHH
T ss_conf 829999999999987998-750----43279998509999999999982899778898658863322569--99899999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHH
Q ss_conf 99862312112333321000123332211113457761266210135445565210113586289997545599889999
Q gi|254781187|r 131 WLSMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPDIINKS 210 (367)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d~i~e~ 210 (367)
T Consensus 81 l~~~~-----------------------------------------------~~~p~~g~~-KV~II~~ae~m~~~AaNA 112 (313)
T PRK05564 81 IIEEV-----------------------------------------------NKKPYEGDK-KVIIIYKSEKMTEQAQNA 112 (313)
T ss_pred HHHHH-----------------------------------------------HHCCCCCCC-EEEEECCHHHHCHHHHHH
T ss_conf 99998-----------------------------------------------408625895-699980777758999999
Q ss_pred HHHHHHCCCCCEEEEEEEC
Q ss_conf 8987406988258999807
Q gi|254781187|r 211 ILGFFTELNPNRFWIMTSN 229 (367)
Q Consensus 211 i~g~Lt~~~~~~~~i~igN 229 (367)
T Consensus 113 LLKtLEEPP~~t~fIL~t~ 131 (313)
T PRK05564 113 FLKTIEEPPKGVFIILLCE 131 (313)
T ss_pred HHHCCCCCCCCEEEEEEEC
T ss_conf 8455036899858998649