HHsearch alignment for GI: 254781187 and conserved domain: PRK06526

>PRK06526 transposase; Provisional.
Probab=95.86  E-value=0.13  Score=28.96  Aligned_cols=127  Identities=14%  Similarity=0.139  Sum_probs=66.3

Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             84289999999888875124555554112477614886788999999999999708997799971537999999999999
Q gi|254781187|r   50 QPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVS  129 (367)
Q Consensus        50 ~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~  129 (367)
T Consensus        80 ~l~~~~i~~La~-~~fi~~~~--------Nvil~G~~GtGKThLA~Alg~~-A-~~~G~~v~f~~~~~------L~~~L~  142 (254)
T PRK06526         80 SLKRDTIAHLGT-LDFVTGKE--------NVVFLGPPGTGKTHLAIGLGIR-A-CQAGHRVLFATAAQ------WVARLA  142 (254)
T ss_pred             CCCHHHHHHHHC-CCHHHCCC--------CEEEECCCCCCHHHHHHHHHHH-H-HHCCCCEEEEEHHH------HHHHHH
T ss_conf             989999999863-71776588--------7899899998689999999999-9-98699679987799------999999


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCC-----
Q ss_conf             999862312112333321000123332211113457761266210135445565210113586289997545599-----
Q gi|254781187|r  130 KWLSMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTP-----  204 (367)
Q Consensus       130 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~-----  204 (367)
T Consensus       143 ~a~~~--------------------------------g~-----------~~~~~~~l--~~~dLLIiDe~g~~~~~~~~  177 (254)
T PRK06526        143 AAHHA--------------------------------GR-----------LQDELVKL--GRIPLLIVDEVGYIPFEAEA  177 (254)
T ss_pred             HHHHC--------------------------------CC-----------HHHHHHHH--HCCCEEEEECCCCCCCCHHH
T ss_conf             98855--------------------------------80-----------99999985--13687765021364478899


Q ss_pred             -HHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHCC
Q ss_conf             -8899998987406988258999807899987688754112
Q gi|254781187|r  205 -DIINKSILGFFTELNPNRFWIMTSNTRRLNGWFYDIFNIP  244 (367)
Q Consensus       205 -d~i~e~i~g~Lt~~~~~~~~i~igNP~r~~g~Fye~~~~~  244 (367)
T Consensus       178 a~~lf~li~~Ry---e~~S-~IiTS--n~~~~~W~~~f~D~  212 (254)
T PRK06526        178 ANLFFQLVSSRY---ERAS-LIVTS--NKPFGRWGEVFGDD  212 (254)
T ss_pred             HHHHHHHHHHHH---CCCC-EEEEC--CCCHHHHHHHCCCH
T ss_conf             999999999997---4588-67665--89866888864868