HHsearch alignment for GI: 254781187 and conserved domain: PRK06526
>PRK06526 transposase; Provisional.
Probab=95.86 E-value=0.13 Score=28.96 Aligned_cols=127 Identities=14% Similarity=0.139 Sum_probs=66.3
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 84289999999888875124555554112477614886788999999999999708997799971537999999999999
Q gi|254781187|r 50 QPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVS 129 (367)
Q Consensus 50 ~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~ 129 (367)
T Consensus 80 ~l~~~~i~~La~-~~fi~~~~--------Nvil~G~~GtGKThLA~Alg~~-A-~~~G~~v~f~~~~~------L~~~L~ 142 (254)
T PRK06526 80 SLKRDTIAHLGT-LDFVTGKE--------NVVFLGPPGTGKTHLAIGLGIR-A-CQAGHRVLFATAAQ------WVARLA 142 (254)
T ss_pred CCCHHHHHHHHC-CCHHHCCC--------CEEEECCCCCCHHHHHHHHHHH-H-HHCCCCEEEEEHHH------HHHHHH
T ss_conf 989999999863-71776588--------7899899998689999999999-9-98699679987799------999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCC-----
Q ss_conf 999862312112333321000123332211113457761266210135445565210113586289997545599-----
Q gi|254781187|r 130 KWLSMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTP----- 204 (367)
Q Consensus 130 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~----- 204 (367)
T Consensus 143 ~a~~~--------------------------------g~-----------~~~~~~~l--~~~dLLIiDe~g~~~~~~~~ 177 (254)
T PRK06526 143 AAHHA--------------------------------GR-----------LQDELVKL--GRIPLLIVDEVGYIPFEAEA 177 (254)
T ss_pred HHHHC--------------------------------CC-----------HHHHHHHH--HCCCEEEEECCCCCCCCHHH
T ss_conf 98855--------------------------------80-----------99999985--13687765021364478899
Q ss_pred -HHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHCC
Q ss_conf -8899998987406988258999807899987688754112
Q gi|254781187|r 205 -DIINKSILGFFTELNPNRFWIMTSNTRRLNGWFYDIFNIP 244 (367)
Q Consensus 205 -d~i~e~i~g~Lt~~~~~~~~i~igNP~r~~g~Fye~~~~~ 244 (367)
T Consensus 178 a~~lf~li~~Ry---e~~S-~IiTS--n~~~~~W~~~f~D~ 212 (254)
T PRK06526 178 ANLFFQLVSSRY---ERAS-LIVTS--NKPFGRWGEVFGDD 212 (254)
T ss_pred HHHHHHHHHHHH---CCCC-EEEEC--CCCHHHHHHHCCCH
T ss_conf 999999999997---4588-67665--89866888864868