HHsearch alignment for GI: 254781187 and conserved domain: PRK06647
>PRK06647 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.25 E-value=0.012 Score=35.19 Aligned_cols=137 Identities=18% Similarity=0.112 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC-CCHHHHHHHHHHHHHHHH
Q ss_conf 9999999888875124555554112477614886788999999999999708997799971-537999999999999999
Q gi|254781187|r 54 WQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIA-NSETQLKNTLWAEVSKWL 132 (367)
Q Consensus 54 wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A-~t~~Q~~~~lw~ei~k~~ 132 (367)
T Consensus 20 GQe~vv~~L~nai~~~rl~-HA----yLFsGprG~GKTt~ArilAk~LnC~~~~~~~PCg~C~sC--------~~i~~-- 84 (560)
T PRK06647 20 GQDFVVETLKHSIEKNKIA-NA----YIFSGPRGVGKTSSARAFARCLNCVNGPTIMPCGECFSC--------KSIDN-- 84 (560)
T ss_pred CCHHHHHHHHHHHHCCCCC-CE----EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHH--------HHHHC--
T ss_conf 9499999999999749977-43----663289987899999999999659999998888788788--------88745--
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf 86231211233332100012333221111345776126621013544556521011358628999754559988999989
Q gi|254781187|r 133 SMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPDIINKSIL 212 (367)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d~i~e~i~ 212 (367)
T Consensus 85 g~~~D--viEida-------------------asn~~VddIR~l~e--~v~~~P~~~~y-KV~IIDEahmLt~~A~NALL 140 (560)
T PRK06647 85 DSSLD--VIEIDG-------------------ASNTSVQDVRQIKE--EIMFPPASSRY-RVYIIDEVHMLSNSAFNALL 140 (560)
T ss_pred CCCCC--EEEECC-------------------CCCCCHHHHHHHHH--HHCCCCCCCCE-EEEEECCHHHCCHHHHHHHH
T ss_conf 99987--576436-------------------45488899999999--86328766870-69996465655999999999
Q ss_pred HHHHCCCCCEEEEEEEC
Q ss_conf 87406988258999807
Q gi|254781187|r 213 GFFTELNPNRFWIMTSN 229 (367)
Q Consensus 213 g~Lt~~~~~~~~i~igN 229 (367)
T Consensus 141 KtLEEPP~~~~FILaTt 157 (560)
T PRK06647 141 KTIEEPPPYIVFIFATT 157 (560)
T ss_pred HHHHCCCCCEEEEEECC
T ss_conf 98634887559999779