HHsearch alignment for GI: 254781187 and conserved domain: PRK06674
>PRK06674 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.24 E-value=0.013 Score=34.92 Aligned_cols=138 Identities=12% Similarity=0.086 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999998888751245555541124776148867889999999999997089977999715379999999999999998
Q gi|254781187|r 54 WQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVSKWLS 133 (367)
Q Consensus 54 wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~k~~~ 133 (367)
T Consensus 20 GQ~~v~~~L~nai~~~ri-~HA----yLF~GprGtGKts~Ari~AkaLnC~~~~~~~pC~--~----C~~C-~~i~~--g 85 (563)
T PRK06674 20 GQEHVTKTLQNALLQEKV-SHA----YLFSGPRGTGKTSIAKVFAKAVNCEHAPVAEPCN--E----CPSC-LGITN--G 85 (563)
T ss_pred CHHHHHHHHHHHHHCCCC-CCE----EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCC--C----CHHH-HHHHC--C
T ss_conf 809999999999984996-503----4312899868999999999985799999988776--6----8789-99855--8
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 62312112333321000123332211113457761266210135445565210113586289997545599889999898
Q gi|254781187|r 134 MLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPDIINKSILG 213 (367)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d~i~e~i~g 213 (367)
T Consensus 86 ~~~D--viEi-----------------Daasn~g--Vd~IR~i~~~--v~~~P~~~~y-KV~IIDeah~Lt~~A~NALLK 141 (563)
T PRK06674 86 SISD--VLEI-----------------DAASNNG--VDEIRDIRDK--VKFAPSAVEY-KVYIIDEVHMLSIGAFNALLK 141 (563)
T ss_pred CCCC--EEEE-----------------CCCCCCC--HHHHHHHHHH--HCCCCCCCCE-EEEEEECHHHCCHHHHHHHHH
T ss_conf 9987--7985-----------------2555578--7999999998--2648867873-799985456379999999999
Q ss_pred HHHCCCCCEEEEEEEC
Q ss_conf 7406988258999807
Q gi|254781187|r 214 FFTELNPNRFWIMTSN 229 (367)
Q Consensus 214 ~Lt~~~~~~~~i~igN 229 (367)
T Consensus 142 tLEEPP~~viFILaTt 157 (563)
T PRK06674 142 TLEEPPGHVIFILATT 157 (563)
T ss_pred HHHCCCCCEEEEEECC
T ss_conf 8638875649999659