HHsearch alignment for GI: 254781187 and conserved domain: PRK06835

Probab=92.25  E-value=0.61  Score=24.73  Aligned_cols=82  Identities=16%  Similarity=0.169  Sum_probs=50.1

Q ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             25988885543014668884436668428999999988887512455555411247761488678899999999999970
Q gi|254781187|r   25 VLSFKNFVMRFFPWGIKGKPLEHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLIST  104 (367)
Q Consensus        25 ~~~~~~f~~~~~~w~~~~~~~~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~  104 (367)
T Consensus       138 ~enF~~F~~~~ys~-~~~-~-~~~~sprenm~~i~~~~~~fi~~----F~~~~~nLlf~G~~G~GKTfLa~~IA~ell~~  210 (330)
T PRK06835        138 ENNFSNFNLNYYSD-EKD-G-DEPISPRENMENILEKCLNFIKN----FDKNNENLLFYGNTGTGKTFLSNCIAKELLDR  210 (330)
T ss_pred             HCCCCCCCHHHCCC-CCC-C-CCCCCHHHHHHHHHHHHHHHHHH----CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf             61431178865399-878-8-88989899999999999999872----47888866988999998899999999999987


Q ss_pred             CCCCEEEE-ECC
Q ss_conf             89977999-715
Q gi|254781187|r  105 RPGMSIIC-IAN  115 (367)
Q Consensus       105 ~~~~~v~~-~A~  115 (367)
T Consensus       211 g--~sViy~ta~  220 (330)
T PRK06835        211 G--KTVIYRTSD  220 (330)
T ss_pred             C--CEEEEEEHH
T ss_conf             9--949996299