HHsearch alignment for GI: 254781187 and conserved domain: PRK07994
>PRK07994 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.04 E-value=0.012 Score=35.11 Aligned_cols=134 Identities=15% Similarity=0.144 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999998888751245555541124776148867889999999999997089977999715379999999999999998
Q gi|254781187|r 54 WQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVSKWLS 133 (367)
Q Consensus 54 wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~k~~~ 133 (367)
T Consensus 20 GQ~~v~~~l~na~~~~r~-~ha----ylf~G~rG~GKtt~ari~ak~lnc~~~~~~~pc----g-~-c~~-c~~i~~--- 84 (643)
T PRK07994 20 GQEHVLTALANGLSLGRI-HHA----YLFSGTRGVGKTSIARLLAKGLNCETGITATPC----G-V-CDN-CREIEQ--- 84 (643)
T ss_pred CCHHHHHHHHHHHHHCCC-CCE----EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC----C-C-CHH-HHHHHC---
T ss_conf 879999999999982986-634----874589988888999999999679999999978----7-6-776-898865---
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 62312112333321000123332211113457761266210135445565210113586289997545599889999898
Q gi|254781187|r 134 MLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPDIINKSILG 213 (367)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d~i~e~i~g 213 (367)
T Consensus 85 ------------------g~~~d~~eid--aas~~~vd~~rel~~--~~~y~p~~~r~k-vyiidEvhmls~~afnalLK 141 (643)
T PRK07994 85 ------------------GRFVDLIEID--AASRTKVEDTRDLLD--NVQYAPARGRFK-VYLIDEVHMLSRHSFNALLK 141 (643)
T ss_pred ------------------CCCCCEEEEE--CCCCCCHHHHHHHHH--HCCCCCCCCCEE-EEEEECHHHCCHHHHHHHHH
T ss_conf ------------------8988758863--677788899999998--446688778536-99972210158999999998
Q ss_pred HHHCCCCCEEEE
Q ss_conf 740698825899
Q gi|254781187|r 214 FFTELNPNRFWI 225 (367)
Q Consensus 214 ~Lt~~~~~~~~i 225 (367)
T Consensus 142 tlEePp~hv~fi 153 (643)
T PRK07994 142 TLEEPPAHVKFL 153 (643)
T ss_pred HHCCCCHHCEEE
T ss_conf 623786100899