HHsearch alignment for GI: 254781187 and conserved domain: PRK11634

>PRK11634 ATP-dependent RNA helicase DeaD; Provisional.
Probab=97.81  E-value=0.00045  Score=43.94  Aligned_cols=76  Identities=14%  Similarity=0.100  Sum_probs=55.5

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHC-CCCEEEEECCCHHHHHHH
Q ss_conf             4366684289999999888875124555554112477614886788999999999999708-997799971537999999
Q gi|254781187|r   45 LEHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTR-PGMSIICIANSETQLKNT  123 (367)
Q Consensus        45 ~~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~-~~~~v~~~A~t~~Q~~~~  123 (367)
T Consensus        23 ~~Gf~~PTpIQ~~aIP~iL~G----k--------Dvi~~AqTGSGKTlAFlLPiL~~l~~~~~~pqaLIL~PTRELA~QV   90 (629)
T PRK11634         23 DLGYEKPSPIQAECIPHLLNG----R--------DVLGMAQTGSGKTAAFSLPLLHNLDPELKAPQILVLAPTRELAVQV   90 (629)
T ss_pred             HCCCCCCCHHHHHHHHHHHCC----C--------CEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHH
T ss_conf             879999999999999999679----9--------8899788847899999999999866236898689978998999999


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999999998
Q gi|254781187|r  124 LWAEVSKWLS  133 (367)
Q Consensus       124 lw~ei~k~~~  133 (367)
T Consensus        91 -~~~~~~l~~   99 (629)
T PRK11634         91 -AEAMTDFSK   99 (629)
T ss_pred             -HHHHHHHHH
T ss_conf             -999999972