HHsearch alignment for GI: 254781187 and conserved domain: PRK11634
>PRK11634 ATP-dependent RNA helicase DeaD; Provisional.
Probab=97.81 E-value=0.00045 Score=43.94 Aligned_cols=76 Identities=14% Similarity=0.100 Sum_probs=55.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHC-CCCEEEEECCCHHHHHHH
Q ss_conf 4366684289999999888875124555554112477614886788999999999999708-997799971537999999
Q gi|254781187|r 45 LEHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTR-PGMSIICIANSETQLKNT 123 (367)
Q Consensus 45 ~~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~-~~~~v~~~A~t~~Q~~~~ 123 (367)
T Consensus 23 ~~Gf~~PTpIQ~~aIP~iL~G----k--------Dvi~~AqTGSGKTlAFlLPiL~~l~~~~~~pqaLIL~PTRELA~QV 90 (629)
T PRK11634 23 DLGYEKPSPIQAECIPHLLNG----R--------DVLGMAQTGSGKTAAFSLPLLHNLDPELKAPQILVLAPTRELAVQV 90 (629)
T ss_pred HCCCCCCCHHHHHHHHHHHCC----C--------CEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHH
T ss_conf 879999999999999999679----9--------8899788847899999999999866236898689978998999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999998
Q gi|254781187|r 124 LWAEVSKWLS 133 (367)
Q Consensus 124 lw~ei~k~~~ 133 (367)
T Consensus 91 -~~~~~~l~~ 99 (629)
T PRK11634 91 -AEAMTDFSK 99 (629)
T ss_pred -HHHHHHHHH
T ss_conf -999999972