HHsearch alignment for GI: 254781187 and conserved domain: PRK12323
>PRK12323 DNA polymerase III subunits gamma and tau; Provisional.
Probab=96.64 E-value=0.05 Score=31.41 Aligned_cols=140 Identities=17% Similarity=0.159 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999998888751245555541124776148867889999999999997089977999715379999999999999998
Q gi|254781187|r 54 WQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVSKWLS 133 (367)
Q Consensus 54 wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~k~~~ 133 (367)
T Consensus 20 GQ~~v~~~l~na~~~~r~~-ha----ylf~G~rGvGKTt~ari~Ak~lnc~~~~~~~g~~~~pcg~C-~~-C~~i~~--- 89 (721)
T PRK12323 20 GQEHVVRALTHALEQQRLH-HA----YLFTGTRGVGKTTLSRILAKSLNCTGPDGEGGITAQPCGQC-RA-CTEIDA--- 89 (721)
T ss_pred CCHHHHHHHHHHHHCCCCC-CE----EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-HH-HHHHHC---
T ss_conf 8599999999999719975-44----75027998889899999999976899866789878878776-54-687756---
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 62312112333321000123332211113457761266210135445565210113586289997545599889999898
Q gi|254781187|r 134 MLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPDIINKSILG 213 (367)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d~i~e~i~g 213 (367)
T Consensus 90 ------------------g~~~d~~--EiDaas~~~v~~~r~l~~~~--~y~P~~~~~K-vyiiDevhmls~~afnalLK 146 (721)
T PRK12323 90 ------------------GRFVDYI--EMDAASNRGVDEMAQLLDQA--VYAPTAGRFK-VYMIDEVHMLTNHAFNAMLK 146 (721)
T ss_pred ------------------CCCCCEE--EEECCCCCCHHHHHHHHHHC--CCCCCCCCEE-EEEEECCCCCCHHHHHHHHH
T ss_conf ------------------8987647--74367678889999999854--5588766446-99985400058999999998
Q ss_pred HHHCCCCCEEEEE
Q ss_conf 7406988258999
Q gi|254781187|r 214 FFTELNPNRFWIM 226 (367)
Q Consensus 214 ~Lt~~~~~~~~i~ 226 (367)
T Consensus 147 tlEePP~hv~Fil 159 (721)
T PRK12323 147 TLEEPPPHVKFIL 159 (721)
T ss_pred HHCCCCCCEEEEE
T ss_conf 4017975538999