HHsearch alignment for GI: 254781187 and conserved domain: PRK12724
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional.
Probab=93.59 E-value=0.51 Score=25.22 Aligned_cols=42 Identities=14% Similarity=-0.036 Sum_probs=34.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH
Q ss_conf 477614886788999999999999708997799971537999
Q gi|254781187|r 79 KCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQL 120 (367)
Q Consensus 79 ~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~ 120 (367)
T Consensus 225 vi~lVGPTGVGKTTTiAKLAA~~~l~~~kkVaLIT~DTYRIg 266 (432)
T PRK12724 225 VVFFVGPTGSGKTTSIAKLAAKYFLHMGKSVSLYTTDNYRIA 266 (432)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHH
T ss_conf 999989999888999999999999974992799952665377