HHsearch alignment for GI: 254781187 and conserved domain: PRK12727
>PRK12727 flagellar biosynthesis regulator FlhF; Provisional.
Probab=92.51 E-value=0.74 Score=24.22 Aligned_cols=40 Identities=18% Similarity=0.169 Sum_probs=31.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCC-CCEEEEECCCHHH
Q ss_conf 776148867889999999999997089-9779997153799
Q gi|254781187|r 80 CAISAGRGIGKTTLNAWMMLWLISTRP-GMSIICIANSETQ 119 (367)
Q Consensus 80 ~~v~sgrg~GKS~~~a~~~lw~~~~~~-~~~v~~~A~t~~Q 119 (367)
T Consensus 351 ~AlvGpTGvGKTTT~aKlAa~~~~~~g~~~valit~DtyRi 391 (557)
T PRK12727 351 IALVGPTGAGKTTTIAKLAQRFAAQHAPRDVALVTTDTQRV 391 (557)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCH
T ss_conf 78743777673117999999999973998189997266408