HHsearch alignment for GI: 254781187 and conserved domain: PRK13767
>PRK13767 ATP-dependent helicase; Provisional.
Probab=96.03 E-value=0.043 Score=31.82 Aligned_cols=89 Identities=15% Similarity=0.066 Sum_probs=56.5
Q ss_pred CCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCC
Q ss_conf 57233789999752320125988885543014668884436668428999999988887512455555411247761488
Q gi|254781187|r 7 TDQKLEQELHEMLMHAECVLSFKNFVMRFFPWGIKGKPLEHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGR 86 (367)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~w~~~~~~~~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgr 86 (367)
T Consensus 6 ~~~~~~~~~~~~l-------~p~v--~~---wf-----~~~~~~p~~~Q~~a~~~i~~G~------------~~Li~ApT 56 (878)
T PRK13767 6 TKEYSDEEILSLL-------HPYV--AE---WF-----KRKFGTFTPPQRYAIPLIHEGK------------NVLISSPT 56 (878)
T ss_pred HCCCCHHHHHHHC-------CHHH--HH---HH-----HHCCCCCCHHHHHHHHHHHCCC------------CEEEECCC
T ss_conf 1026757677627-------9899--99---99-----8537999989999999996799------------88998999
Q ss_pred CCCHHHHHHHHHHHHHHH-------CCCCEEEEECCCHHHHHHHH
Q ss_conf 678899999999999970-------89977999715379999999
Q gi|254781187|r 87 GIGKTTLNAWMMLWLIST-------RPGMSIICIANSETQLKNTL 124 (367)
Q Consensus 87 g~GKS~~~a~~~lw~~~~-------~~~~~v~~~A~t~~Q~~~~l 124 (367)
T Consensus 57 GsGKTlAaflp~l~~l~~~~~~~~~~~~~~~LyIsPLkAL~~D~~ 101 (878)
T PRK13767 57 GSGKTLAAFLGIIDELFRLAEEGELEDSVYCIYVSPLRALNNDIH 101 (878)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHH
T ss_conf 813999999999999985000367788728999684798899999