HHsearch alignment for GI: 254781187 and conserved domain: PRK13889

Probab=96.78  E-value=0.018  Score=34.14  Aligned_cols=131  Identities=12%  Similarity=0.019  Sum_probs=72.6

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCEEEEE-EECCCCCCHHHHHHH-HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             89999999888875124555554112477-614886788999999-9999997089977999715379999999999999
Q gi|254781187|r   53 RWQLEFMEAVDVHCHSNVNNSNPTIFKCA-ISAGRGIGKTTLNAW-MMLWLISTRPGMSIICIANSETQLKNTLWAEVSK  130 (367)
Q Consensus        53 ~wq~~~l~~~~~~~~~~~~~~~~~~~~~~-v~sgrg~GKS~~~a~-~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~k  130 (367)
T Consensus       349 ~EQ~~A~~hiT~~----------~--~iavVvG~AGtGKStmL~aAReawE---a~GyrV~GaALsGkAAegLe-~~s--  410 (992)
T PRK13889        349 GEQADALAHVTDG----------R--DLGVVVGYAGTGKSAMLGVAREAWE---AAGYEVRGAALSGIAAENLE-GGS--  410 (992)
T ss_pred             HHHHHHHHHHCCC----------C--CEEEEEECCCCCHHHHHHHHHHHHH---HCCCEEEEECCCHHHHHHHH-HCC--
T ss_conf             9999999986478----------9--7589983388878899999999999---77988981150068999765-347--


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHH
Q ss_conf             99862312112333321000123332211113457761266210135445565210113586289997545599889999
Q gi|254781187|r  131 WLSMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPDIINKS  210 (367)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d~i~e~  210 (367)
T Consensus       411 ----GI-----~Sr----TlAs~e~~-------------------w--~--~g~~~L~--~~dVlVVDEAGMVgSRqMar  452 (992)
T PRK13889        411 ----GI-----ASR----TIASLEHG-------------------W--G--QGRDLLT--ARDVLVIDEAGMVGTRQLER  452 (992)
T ss_pred             ----CC-----CCH----HHHHHHHH-------------------H--H--CCCCCCC--CCCEEEEECCCCCCHHHHHH
T ss_conf             ----94-----316----79999998-------------------7--4--6733478--98589996765577499999


Q ss_pred             HHHHHHCCCCCEEEEEEECC-----CCCCCHHHHHH
Q ss_conf             89874069882589998078-----99987688754
Q gi|254781187|r  211 ILGFFTELNPNRFWIMTSNT-----RRLNGWFYDIF  241 (367)
Q Consensus       211 i~g~Lt~~~~~~~~i~igNP-----~r~~g~Fye~~  241 (367)
T Consensus       453 ll~~Ae~AGAKVV--LVGD~~QLq~IeAGaaFral~  486 (992)
T PRK13889        453 VLSHAADAGAKVV--LVGDPQQLQAIEAGAAFRSIH  486 (992)
T ss_pred             HHHHHHHCCCEEE--EECCHHHCCCCCCCHHHHHHH
T ss_conf             9999998499899--948877718864688999999