HHsearch alignment for GI: 254781187 and conserved domain: TIGR01547

>TIGR01547 phage_term_2 phage terminase, large subunit, PBSX family; InterPro: IPR006437 This group of sequences represent a highly divergent family of the large subunit of phage terminase. All members are encoded by phage genomes or within prophage regions of bacterial genomes. This is a distinct family from the phage terminase family represented by IPR005021 from INTERPRO.; GO: 0006323 DNA packaging.
Probab=99.14  E-value=7e-09  Score=73.43  Aligned_cols=248  Identities=16%  Similarity=0.155  Sum_probs=170.9

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHC-----CCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCCC
Q ss_conf             77614886788999999999999708-----997799971537999999999999999862312-112333321000123
Q gi|254781187|r   80 CAISAGRGIGKTTLNAWMMLWLISTR-----PGMSIICIANSETQLKNTLWAEVSKWLSMLPHR-HWFEMQSLSLHPSGW  153 (367)
Q Consensus        80 ~~v~sgrg~GKS~~~a~~~lw~~~~~-----~~~~v~~~A~t~~Q~~~~lw~ei~k~~~~~~~~-~~~~~~~~~~~~~~~  153 (367)
T Consensus         4 ~~~~G~~~sgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~-----   78 (462)
T TIGR01547         4 IIAKGGRGSGKTFAIALKLVLKLLANKDLYGKPRNILAARKVQNSIRDSVFKDIEDLLSDLGLNLYEFKKSKSPM-----   78 (462)
T ss_pred             EEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC-----
T ss_conf             663266653157899999999998764531488406887402335665668889999987064022132036662-----


Q ss_pred             CCCCCCCCCCCCC---CCEEEEECCCCCCCCCCCCCCCCC--------CCCEEEEECCCCCCHHHHHHHHHHHHCCCCC-
Q ss_conf             3322111134577---612662101354455652101135--------8628999754559988999989874069882-
Q gi|254781187|r  154 YAELLEQSMGIDS---KHYTITCRTYSEERPDTFVGPHNT--------HGMAVFNDEASGTPDIINKSILGFFTELNPN-  221 (367)
Q Consensus       154 ~~~~~~~~~~~~~---~~~~~~a~~~~~~~~ea~~g~h~~--------~~~l~ivDEAsgI~d~i~e~i~g~Lt~~~~~-  221 (367)
T Consensus        79 -------~~~~~~~~~~~~~~f~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~~~~~~~~~~~~~~r~~~~~~  150 (462)
T TIGR01547        79 -------EIKILNTGGGAYFIFK-GLNSDKPEKLKSGAGLGFTLWEVGLLADLWFEEASELTKEDIKELIPRLREPGGKN  150 (462)
T ss_pred             -------EEEECCCCCCEEEEEE-CCCCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCE
T ss_conf             -------5776157886179960-65756246643104664100014455656555444301446888887640577750


Q ss_pred             EEEEEEECCCCCCCHHHHHHHCC--C--CCEE---------------EEEECCCCCCCCC----HHHHHHHHHHCCCCCC
Q ss_conf             58999807899987688754112--2--3504---------------6752333288889----8899999962168800
Q gi|254781187|r  222 RFWIMTSNTRRLNGWFYDIFNIP--L--EDWK---------------RYQIDTRTVEGID----SGFHEGIISRYGLDSD  278 (367)
Q Consensus       222 ~~~i~igNP~r~~g~Fye~~~~~--~--~~w~---------------~~~~~~~d~p~~~----~~~i~~~~~~~gedS~  278 (367)
T Consensus       151 ~~~~~~~nP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dn~~~~~~~~~~~~~~~~~~~~~~~~  230 (462)
T TIGR01547       151 KFIIFSSNPESPLHWVYKDFIENLGEDEFRICDKPPYEYGVVDKKLYILHSTYRDNPFLSGGDVEEYIQELEKLKDRDPA  230 (462)
T ss_pred             EEEEEEECCCCCCCHHHHHHHHCCCCCCHHHHCCCCHHHHHEEECEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHH
T ss_conf             69998408898553056665430477601221011013220000002567420346567611589999999986315613


Q ss_pred             EEEEEEEEEECCCCCCEEECHHHH------HHHHC---CCCCCCCCCCE--EEEEECCCC-CCCEEEEEEECCC
Q ss_conf             026888644327789807829998------64431---57777889848--999963877-8810899997088
Q gi|254781187|r  279 VARIEILGQFPQQEVNNFIPHNYI------EEAMS---REAIDDLYAPL--IMGCDIAGE-GGDKTVVVFRRGN  340 (367)
Q Consensus       279 ~~r~ev~G~Fp~~~~d~~ip~~~i------e~a~~---~~~~~~~~~p~--viGvDvAr~-G~D~Tvi~~r~G~  340 (367)
T Consensus       231 ~~~~~~~G~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  304 (462)
T TIGR01547       231 LYRRILLGEWVSAADVWSLGLPVLTSEGILFKKLDVKAAYIKELPNDPSDFVGGIDAGGVDGNSPSAYVLLGIE  304 (462)
T ss_pred             HHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCCEEEEEEEEE
T ss_conf             43344423510122332204444344411121110022123431232100013201476666530367887200