HHsearch alignment for GI: 254781187 and conserved domain: TIGR02782
>TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB; InterPro: IPR014149 This entry represents TrbB, a protein, which is encoded in the trb locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for plasmid conjugative transfer . TrbB is a homologue of the vir system VirB11 ATPase , and the Flp pilus system ATPase TadA ..
Probab=97.12 E-value=0.0018 Score=40.30 Aligned_cols=56 Identities=18% Similarity=0.261 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH-HCCCCEEEEECCCHH
Q ss_conf 2899999998888751245555541124776148867889999999999997-089977999715379
Q gi|254781187|r 52 HRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLIS-TRPGMSIICIANSET 118 (367)
Q Consensus 52 ~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~-~~~~~~v~~~A~t~~ 118 (367)
T Consensus 125 taaQ~d~l~~Av~-ar----------~NIlv~GGTGSGKTTLaNAlla~I~~l~~P~dR~vIiEDT~E 181 (315)
T TIGR02782 125 TAAQRDVLREAVA-AR----------KNILVVGGTGSGKTTLANALLAEIAKLNDPDDRVVIIEDTAE 181 (315)
T ss_pred CHHHHHHHHHHHH-HC----------CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHH
T ss_conf 5789999999997-12----------988998145885799999999988521699961899854713