HHsearch alignment for GI: 254781187 and conserved domain: cd00046
>cd00046 DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
Probab=97.71 E-value=0.00027 Score=45.31 Aligned_cols=53 Identities=17% Similarity=0.236 Sum_probs=41.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf 477614886788999999999999708997799971537999999999999999
Q gi|254781187|r 79 KCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVSKWL 132 (367)
Q Consensus 79 ~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~k~~ 132 (367)
T Consensus 2 ~~lv~~ptGsGKT~~~~~~~~~~~~~~~~~~~lil~Pt~~L~~q~-~~~~~~~~ 54 (144)
T cd00046 2 DVLLAAPTGSGKTLAALLPILELLDSLKGGQVLVLAPTRELANQV-AERLKELF 54 (144)
T ss_pred CEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-HHHHHHHC
T ss_conf 999988997179999999999999756897699974679999999-99999974