HHsearch alignment for GI: 254781187 and conserved domain: pfam05970

Probab=96.95  E-value=0.002  Score=39.94  Aligned_cols=97  Identities=14%  Similarity=-0.003  Sum_probs=54.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH-HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             886788999999999999708997799971537999999-9999999998623121123333210001233322111134
Q gi|254781187|r   85 GRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNT-LWAEVSKWLSMLPHRHWFEMQSLSLHPSGWYAELLEQSMG  163 (367)
Q Consensus        85 grg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~-lw~ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (367)
T Consensus         2 ~AGTGKS~ll~~i~~~l~--~~~~~v~vtA~TGiAA~~i~gG~TiHs~~g--------------------i~------~~   53 (418)
T pfam05970         2 YGGTGKTFLWNALSARIR--SRGKIVLNVASSGIAALLLPGGRTAHSRFG--------------------IP------LD   53 (418)
T ss_pred             CCCCCHHHHHHHHHHHHH--HCCCEEEEECCHHHHHHCCCCCEEHHHCCC--------------------CC------CC
T ss_conf             798879999999999997--689889998968999851699873985269--------------------89------88


Q ss_pred             CCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             57761266210135445565210113586289997545599889999898740
Q gi|254781187|r  164 IDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPDIINKSILGFFT  216 (367)
Q Consensus       164 ~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d~i~e~i~g~Lt  216 (367)
T Consensus        54 ~~~~~~~~~--~~---~~~~~~~~~--~~~vLIIDEiSMv~~~lfd~id~~lr   99 (418)
T pfam05970        54 IDEDSTCKI--KR---GSKLAELLK--KASLIIWDEAPMTHRHCFEALDRTLR   99 (418)
T ss_pred             CCCCCCEEE--CC---CHHHHHHHH--HCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf             774201121--33---778899874--08799985411357899999999999