HHsearch alignment for GI: 254781187 and conserved domain: pfam07652

>pfam07652 Flavi_DEAD Flavivirus DEAD domain.
Probab=97.07  E-value=0.008  Score=36.29  Aligned_cols=131  Identities=18%  Similarity=0.090  Sum_probs=74.7

Q ss_pred             EEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             76148867889999999999997089977999715379999999999999998623121123333210001233322111
Q gi|254781187|r   81 AISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVSKWLSMLPHRHWFEMQSLSLHPSGWYAELLEQ  160 (367)
Q Consensus        81 ~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (367)
T Consensus         6 ~ld~HPGaGKTr~vLP~~v~~-~i~~~lRtlVLaPTR-----VV~~Em~eAL~g~~vr~~t~a~~~--------------   65 (146)
T pfam07652         6 VLDLHPGAGKTRKVLPELVRE-CIDRRLRTLVLAPTR-----VVLAEMEEALRGLPIRYHTPAVSS--------------   65 (146)
T ss_pred             EEECCCCCCCCCHHHHHHHHH-HHHCCCEEEEECCHH-----HHHHHHHHHHCCCCCEEECHHHHC--------------
T ss_conf             985389999702248999999-997286189977279-----999999999758994675234313--------------


Q ss_pred             CCCCCCCCEEEE-----ECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH---HCCCCCEEEEEEECCCC
Q ss_conf             134577612662-----1013544556521011358628999754559988999989874---06988258999807899
Q gi|254781187|r  161 SMGIDSKHYTIT-----CRTYSEERPDTFVGPHNTHGMAVFNDEASGTPDIINKSILGFF---TELNPNRFWIMTSNTRR  232 (367)
Q Consensus       161 ~~~~~~~~~~~~-----a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d~i~e~i~g~L---t~~~~~~~~i~igNP~r  232 (367)
T Consensus        66 ---~~~~~~ivdvmCHAT~t~r~-----l~~~~~~ny~viIMDE~H~~DP~SIAa-rG~~~~~~~~g~~a~i~mTATPPG  136 (146)
T pfam07652        66 ---EHTGREIVDVMCHATFTQRL-----LSPVRVPNYEVIIMDEAHFTDPASIAA-RGYISTLVELGEAAAIFMTATPPG  136 (146)
T ss_pred             ---CCCCCCEEEEECHHHHHHHH-----HCCCCCCCEEEEEEECCCCCCHHHHHH-HHHHHHHHHCCCEEEEEEECCCCC
T ss_conf             ---66888418897159888897-----368885644799985122389899998-899998854386579999568999


Q ss_pred             CCCHHHHH
Q ss_conf             98768875
Q gi|254781187|r  233 LNGWFYDI  240 (367)
Q Consensus       233 ~~g~Fye~  240 (367)
T Consensus       137 ~~~~fp~S  144 (146)
T pfam07652       137 TSDPFPES  144 (146)
T ss_pred             CCCCCCCC
T ss_conf             89989888