HHsearch alignment for GI: 254781187 and conserved domain: smart00382

>smart00382 AAA ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.

Probab=92.73  E-value=0.68  Score=24.47  Aligned_cols=40  Identities=25%  Similarity=0.137  Sum_probs=26.5

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH
Q ss_conf             477614886788999999999999708997799971537999
Q gi|254781187|r   79 KCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQL  120 (367)
Q Consensus        79 ~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~  120 (367)
T Consensus         4 ~ill~G~~GsGKTtl~~~la~~~~~~~--~~v~~~~~~~~~~   43 (148)
T smart00382        4 VILIVGPPGSGKTTLARALARELGPPG--GGVIYIDGEDILE   43 (148)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHCCCC--CCEEEEEHHHHHH
T ss_conf             899999997029999999998726689--9689987599898