HHsearch alignment for GI: 254781187 and conserved domain: smart00487
>smart00487 DEXDc DEAD-like helicases superfamily.
Probab=98.58 E-value=1e-06 Score=60.14 Aligned_cols=173 Identities=13% Similarity=0.023 Sum_probs=92.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH
Q ss_conf 36668428999999988887512455555411247761488678899999999999970899779997153799999999
Q gi|254781187|r 46 EHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLW 125 (367)
Q Consensus 46 ~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw 125 (367)
T Consensus 4 ~~~~~~~~~Q~~~~~~~~~~~-----------~~~~i~~~tGsGKT~~~~~~~~~~~~~~~~~~~li~~P~~~l~~q~-~ 71 (201)
T smart00487 4 FGFEPLRPYQKEAIEALLSGL-----------RDVILAAPTGSGKTLAALLPALEALKRGKGKRVLVLVPTRELAEQW-A 71 (201)
T ss_pred CCCCCCCHHHHHHHHHHHCCC-----------CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHH-H
T ss_conf 379999988999999998389-----------9889989999609999999999986338997599990859999999-9
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 99999998623121123333210001233322111134577-61266210135445565210113586289997545599
Q gi|254781187|r 126 AEVSKWLSMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDS-KHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTP 204 (367)
Q Consensus 126 ~ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~ 204 (367)
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~i~i~t~~~l~~-~~~~~~-~~~~~~~~vIiDE~H~~~ 142 (201)
T smart00487 72 EELKKLGPSLGLKVVGLYGGDSK-------REQLRKLESGKTDILVTTPGRLLD-LLENDL-LELSNVDLVILDEAHRLL 142 (201)
T ss_pred HHHHHCCCCCEEEEEEEECCCCH-------HHHHHHHHCCCCCEEEECHHHHHH-HHHHCC-CCCCCCEEEEEECHHHHH
T ss_conf 88601021020445565247737-------999999975999899955899999-997275-452543199998967751
Q ss_pred H-HHHHHHHHHHH--CCCCCEEEEEEECCCCCCCHHHHH
Q ss_conf 8-89999898740--698825899980789998768875
Q gi|254781187|r 205 D-IINKSILGFFT--ELNPNRFWIMTSNTRRLNGWFYDI 240 (367)
Q Consensus 205 d-~i~e~i~g~Lt--~~~~~~~~i~igNP~r~~g~Fye~ 240 (367)
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~-~i~lSAT~~~~~~~~~~~ 180 (201)
T smart00487 143 DGGFGDQLEKLLKLLPKNVQ-LLLLSATPPEEIENLLEL 180 (201)
T ss_pred CCCCHHHHHHHHHHCCCCCC-EEEECCCCCHHHHHHHHH
T ss_conf 25709999999996799997-899924898689999999