HHsearch results for GI: 254781187 and protein with PDBid: 1qde_A
>1qde_A EIF4A, translation initiation factor 4A; DEAD box protein family, gene regulation; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 1qva_A
Probab=97.39 E-value=0.0012 Score=40.12 Aligned_cols=72 Identities=18% Similarity=0.075 Sum_probs=52.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCC-CCEEEEECCCHHHHHHHH
Q ss_conf 3666842899999998888751245555541124776148867889999999999997089-977999715379999999
Q gi|254781187|r 46 EHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRP-GMSIICIANSETQLKNTL 124 (367)
Q Consensus 46 ~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~-~~~v~~~A~t~~Q~~~~l 124 (367)
.+|..|++-|.+.+..+-.+ . .+.+.|+.|+|||.....-++-.+.... ..++++++|+..-+..+
T Consensus 32 ~g~~~pt~IQ~~aip~il~g----~--------dvii~a~TGsGKTlay~lp~i~~i~~~~~~~~~lil~pt~el~~q~- 98 (224)
T 1qde_A 32 YGFEEPSAIQQRAIMPIIEG----H--------DVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQI- 98 (224)
T ss_dssp HTCCSCCHHHHHHHHHHHTT----C--------CEEEECCTTSSHHHHHHHHHHHHCCTTCCSCCEEEECSSHHHHHHH-
T ss_pred CCCCCCCHHHHHHHHHHHCC----C--------CEEEECCCCCCCEEEEECHHHHHHHCCCCCCEEEEEECCHHHHHHH-
T ss_conf 79999999999999999779----9--------8899898888751245211055551256683399992545254343-
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254781187|r 125 WAEVSK 130 (367)
Q Consensus 125 w~ei~k 130 (367)
...+..
T Consensus 99 ~~~~~~ 104 (224)
T 1qde_A 99 QKVVMA 104 (224)
T ss_dssp HHHHHH
T ss_pred HHHHCC
T ss_conf 333222