HHsearch results for GI: 254781187 and protein with PDBid: 1wp9_A
>1wp9_A ATP-dependent RNA helicase, putative; ATPase, DNA replication, DNA repair, DNA recombination, hydrolase; 2.90A {Pyrococcus furiosus dsm 3638} SCOP: c.37.1.19 c.37.1.19
Probab=98.59 E-value=3.6e-07 Score=61.63 Aligned_cols=72 Identities=17% Similarity=0.271 Sum_probs=48.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH
Q ss_conf 66684289999999888875124555554112477614886788999999999999708997799971537999999999
Q gi|254781187|r 47 HFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWA 126 (367)
Q Consensus 47 ~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ 126 (367)
++-.|++||.+++.... ++ .+.|+++.|+|||.++...+. ..+...+.++++++|+..-+.+. ..
T Consensus 6 ~~~~pr~yQ~~~~~~~~---~~----------n~ll~~pTG~GKT~~a~~~~~-~~~~~~~~~vlil~Pt~~L~~Q~-~~ 70 (494)
T 1wp9_A 6 DLIQPRIYQEVIYAKCK---ET----------NCLIVLPTGLGKTLIAMMIAE-YRLTKYGGKVLMLAPTKPLVLQH-AE 70 (494)
T ss_dssp HHHCCCHHHHHHHHHGG---GS----------CEEEECCTTSCHHHHHHHHHH-HHHHHSCSCEEEECSSHHHHHHH-HH
T ss_pred CCCCCCHHHHHHHHHHH---CC----------CEEEEECCCCHHHHHHHHHHH-HHHHHCCCCEEEEECCHHHHHHH-HH
T ss_conf 88899999999999995---79----------959997997729999999999-99985699199994849999999-99
Q ss_pred HHHHHHH
Q ss_conf 9999998
Q gi|254781187|r 127 EVSKWLS 133 (367)
Q Consensus 127 ei~k~~~ 133 (367)
+++++..
T Consensus 71 ~~~~~~~ 77 (494)
T 1wp9_A 71 SFRRLFN 77 (494)
T ss_dssp HHHHHBC
T ss_pred HHHHHHC
T ss_conf 9999746