HHsearch results for GI: 254781187 and protein with PDBid: 1wp9_A

>1wp9_A ATP-dependent RNA helicase, putative; ATPase, DNA replication, DNA repair, DNA recombination, hydrolase; 2.90A {Pyrococcus furiosus dsm 3638} SCOP: c.37.1.19 c.37.1.19
Probab=98.59  E-value=3.6e-07  Score=61.63  Aligned_cols=72  Identities=17%  Similarity=0.271  Sum_probs=48.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH
Q ss_conf             66684289999999888875124555554112477614886788999999999999708997799971537999999999
Q gi|254781187|r   47 HFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWA  126 (367)
Q Consensus        47 ~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~  126 (367)
                      ++-.|++||.+++....   ++          .+.|+++.|+|||.++...+. ..+...+.++++++|+..-+.+. ..
T Consensus         6 ~~~~pr~yQ~~~~~~~~---~~----------n~ll~~pTG~GKT~~a~~~~~-~~~~~~~~~vlil~Pt~~L~~Q~-~~   70 (494)
T 1wp9_A            6 DLIQPRIYQEVIYAKCK---ET----------NCLIVLPTGLGKTLIAMMIAE-YRLTKYGGKVLMLAPTKPLVLQH-AE   70 (494)
T ss_dssp             HHHCCCHHHHHHHHHGG---GS----------CEEEECCTTSCHHHHHHHHHH-HHHHHSCSCEEEECSSHHHHHHH-HH
T ss_pred             CCCCCCHHHHHHHHHHH---CC----------CEEEEECCCCHHHHHHHHHHH-HHHHHCCCCEEEEECCHHHHHHH-HH
T ss_conf             88899999999999995---79----------959997997729999999999-99985699199994849999999-99


Q ss_pred             HHHHHHH
Q ss_conf             9999998
Q gi|254781187|r  127 EVSKWLS  133 (367)
Q Consensus       127 ei~k~~~  133 (367)
                      +++++..
T Consensus        71 ~~~~~~~   77 (494)
T 1wp9_A           71 SFRRLFN   77 (494)
T ss_dssp             HHHHHBC
T ss_pred             HHHHHHC
T ss_conf             9999746