HHsearch results for GI: 254781187 and protein with PDBid: 1wrb_A
>1wrb_A DJVLGB; RNA helicase, DEAD BOX, VASA, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Dugesia japonica} SCOP: c.37.1.19
Probab=97.87 E-value=0.00011 Score=46.26 Aligned_cols=98 Identities=15% Similarity=0.105 Sum_probs=67.2
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 01259888855430146688844366684289999999888875124555554112477614886788999999999999
Q gi|254781187|r 23 ECVLSFKNFVMRFFPWGIKGKPLEHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLI 102 (367)
Q Consensus 23 ~~~~~~~~f~~~~~~w~~~~~~~~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~ 102 (367)
+...+|..+= .-++=...+.-.+|..|++-|.+.+-.+-++ . -+.+.|..|+|||.....-++..+
T Consensus 20 ~~~~sF~~l~--l~~~ll~~L~~~g~~~pt~IQ~~aip~il~g----~--------dvi~~A~TGsGKTlayllP~l~~i 85 (253)
T 1wrb_A 20 NVIENFDELK--LDPTIRNNILLASYQRPTPIQKNAIPAILEH----R--------DIMACAQTGSGKTAAFLIPIINHL 85 (253)
T ss_dssp SCCCSSGGGS--CCCSTTTTTTTTTCCSCCHHHHHHHHHHHTT----C--------CEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCCCCHHHCC--CCHHHHHHHHHCCCCCCCHHHHHHHHHHHCC----C--------CEEEECCCCCCCEEEEHHHHHHHH
T ss_conf 7559977779--8999999999879999999999999999779----9--------889982599997316617999998
Q ss_pred HHC----------CCCEEEEECCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 708----------997799971537999999999999999862
Q gi|254781187|r 103 STR----------PGMSIICIANSETQLKNTLWAEVSKWLSML 135 (367)
Q Consensus 103 ~~~----------~~~~v~~~A~t~~Q~~~~lw~ei~k~~~~~ 135 (367)
... .+.++++++||...+.++ ..++.......
T Consensus 86 ~~~~~~~~~~~~~~~~~alIl~PTreL~~qv-~~~~~~~~~~~ 127 (253)
T 1wrb_A 86 VCQDLNQQRYSKTAYPKCLILAPTRELAIQI-LSESQKFSLNT 127 (253)
T ss_dssp HTTCC------CCBCCSEEEECSSHHHHHHH-HHHHHHHHTTS
T ss_pred HHCCCCCCCCCCCCCCEEEEECCCHHHHHHH-HHHHHHHCCCC
T ss_conf 7312112345667884799975777775302-45544212578