HHsearch results for GI: 254781187 and protein with PDBid: 2gxq_A
>2gxq_A Heat resistant RNA dependent ATPase; RNA helicase, atomic resolution, AMP complex, ribosome biogenesis, thermophilic, hydrolase; HET: AMP; 1.20A {Thermus thermophilus HB27} PDB: 2gxs_A* 2gxu_A
Probab=97.73 E-value=6.7e-05 Score=47.69 Aligned_cols=73 Identities=12% Similarity=0.015 Sum_probs=53.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCC----CCEEEEECCCHHHHH
Q ss_conf 3666842899999998888751245555541124776148867889999999999997089----977999715379999
Q gi|254781187|r 46 EHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRP----GMSIICIANSETQLK 121 (367)
Q Consensus 46 ~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~----~~~v~~~A~t~~Q~~ 121 (367)
.+|..|++.|.+.+..+-+.. .+.+.|..|+|||.....-++..+.... +.++++++||..-+.
T Consensus 19 ~g~~~pt~iQ~~aip~il~g~------------dvi~~a~TGsGKTlay~lp~l~~~~~~~~~~~~~~alil~PtreLa~ 86 (207)
T 2gxq_A 19 RGLTTPTPIQAAALPLALEGK------------DLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLTPTRELAL 86 (207)
T ss_dssp TTCCSCCHHHHHHHHHHHTTC------------CEEEECCTTSCHHHHHHHHHHHHCCCCCCTTCCCSEEEECSSHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHCCC------------CEEEECCCCCCCCCEEECCHHHHHCCCCCCCCCCEEEEEECCHHHHH
T ss_conf 799999999999999997799------------88998889999743430507765301100368987999979899999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254781187|r 122 NTLWAEVSKW 131 (367)
Q Consensus 122 ~~lw~ei~k~ 131 (367)
++ ..++++.
T Consensus 87 qi-~~~~~~l 95 (207)
T 2gxq_A 87 QV-ASELTAV 95 (207)
T ss_dssp HH-HHHHHHH
T ss_pred HH-HHHHHHH
T ss_conf 99-9988876