HHsearch results for GI: 254781187 and protein with PDBid: 2kbe_A
>2kbe_A ATP-dependent RNA helicase DBP5; DBP5P, ATP-binding, cytoplasm, hydrolase, membrane, mRNA transport, nuclear pore complex; NMR {Saccharomyces cerevisiae}
Probab=97.29 E-value=0.00086 Score=40.90 Aligned_cols=69 Identities=23% Similarity=0.264 Sum_probs=50.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCC-CCEEEEECCCHHHHHHHH
Q ss_conf 3666842899999998888751245555541124776148867889999999999997089-977999715379999999
Q gi|254781187|r 46 EHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRP-GMSIICIANSETQLKNTL 124 (367)
Q Consensus 46 ~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~-~~~v~~~A~t~~Q~~~~l 124 (367)
.+|..|++-|...+..+-. +.. ..+.+.|..|+|||.....-++..+.... ...+++++++...+..+.
T Consensus 40 ~g~~~pt~iQ~~aIp~~l~----g~~------~dvli~a~TGsGKTlay~lp~l~~l~~~~~~~~~~il~~~~~~~~~~~ 109 (226)
T 2kbe_A 40 MKFQKPSKIQERALPLLLH----NPP------RNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTL 109 (226)
T ss_dssp SSSSCCCSHHHHHHHHSSC----CSS------CCEEEESSTTCHHHHHHHHHHHHHCCCTTCCCCEEEECSSHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHC----CCC------CCEEEECCCCCCCCEEEECCCHHEECCCCCCCEEEEEECCHHHHHHHH
T ss_conf 8999999999999999974----998------888998668987200222340101043578840899825578745577