HHsearch results for GI: 254781187 and protein with PDBid: 2o0j_A
>2o0j_A Terminase, DNA packaging protein GP17; nucleotide-binding fold, hydrolase; HET: DNA ADP; 1.80A {Enterobacteria phage T4} PDB: 2o0h_A* 2o0k_A*
Probab=99.98 E-value=9.9e-31 Score=206.04 Aligned_cols=244 Identities=13% Similarity=0.106 Sum_probs=174.1
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCC---CC-CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf 545723378999975232012598888554301466---88-84436668428999999988887512455555411247
Q gi|254781187|r 5 ISTDQKLEQELHEMLMHAECVLSFKNFVMRFFPWGI---KG-KPLEHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKC 80 (367)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~w~~---~~-~~~~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~ 80 (367)
-...++|++||.++ .+|..||.+|+.. |.+=+ +| .|+ .|.++|.++++.+.+ .+|++
T Consensus 122 ~~~~~~t~e~~~e~---~kc~~dp~yF~~~-y~~i~~~~~G~ipF----~Lyp~Qkell~~~~~-----------~Rf~I 182 (385)
T 2o0j_A 122 NIKTQWTREMVEEW---KKCRDDIVYFAET-YCAITHIDYGVIKV----QLRDYQRDMLKIMSS-----------KRMTV 182 (385)
T ss_dssp TCCCCCCHHHHHHH---HHHHHCHHHHHHH-HCEEECSSSCEEEC----CCCHHHHHHHHHHHH-----------SSEEE
T ss_pred CCCCCCCHHHHHHH---HHHHCCHHHHHHH-EEEEECCCCCEEEC----CCCHHHHHHHHHHHH-----------CCEEE
T ss_conf 98667799999999---9984198999862-37998888985527----776999999999975-----------04789
Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 76148867889999999999997089977999715379999999999999998623121123333210001233322111
Q gi|254781187|r 81 AISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVSKWLSMLPHRHWFEMQSLSLHPSGWYAELLEQ 160 (367)
Q Consensus 81 ~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (367)
|.+|||+|||++++++++|+++++++.+++++|++.+|++.+ +..++.+++.+|... .......+..
T Consensus 183 -vlKsRQ~GKTT~~a~~~L~~Alf~~~~~i~IiA~k~~~A~~i-~~~ik~~~e~lP~~~-----------~~~~~~~~~~ 249 (385)
T 2o0j_A 183 -CNLSRQLGKTTVVAIFLAHFVCFNKDKAVGILAHKGSMSAEV-LDRTKQAIELLPDFL-----------QPGIVEWNKG 249 (385)
T ss_dssp -EEECSSSCHHHHHHHHHHHHHHSSSSCEEEEEESSHHHHHHH-HHHHHHHHHHSCTTT-----------SCCEEEECSS
T ss_pred -EEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH-HHHHHHHHHHCHHHH-----------HHCCCHHHHH
T ss_conf -996266872087999999999726677148861537889999-999999986561655-----------3023102223
Q ss_pred CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCH--HHHHH-HHHHHHCCCCCEEEEEEECCCCCCCHH
Q ss_conf 134577612662101354455652101135862899975455998--89999-898740698825899980789998768
Q gi|254781187|r 161 SMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPD--IINKS-ILGFFTELNPNRFWIMTSNTRRLNGWF 237 (367)
Q Consensus 161 ~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d--~i~e~-i~g~Lt~~~~~~~~i~igNP~r~~g~F 237 (367)
.+...+++.++.+. .+..+.+|....++++||++++++ .+|.+ +.+++++.+++ ++++|||.+ .|+|
T Consensus 250 ~~~~~ngs~i~~~a-------~s~da~RG~~~~~lilDE~Afi~~~~e~~~~~~~~~~s~~~Gk--iIiiSTPNG-~N~F 319 (385)
T 2o0j_A 250 SIELDNGSSIGAYA-------SSPDAVRGNSFAMIYIEDCAFIPNFHDSWLAIQPVISSGRRSK--IIITTTPNG-LNHF 319 (385)
T ss_dssp EEEETTSCEEEEEE-------CSHHHHHTSCCSEEEEESGGGSTTHHHHHHHHHHHHHSTTCCE--EEEEECCCS-SSHH
T ss_pred HCCCCCCCCEEECC-------CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCE--EEEEECCCC-CCHH
T ss_conf 12357863101023-------4556545420254203265410026888875313422489803--999989998-7049
Q ss_pred HHHHHCC---CCCEEEEEECCCCCCCC----------CHHHHHHHHHHCCCCCCEEEEEEEEEECCCC
Q ss_conf 8754112---23504675233328888----------9889999996216880002688864432778
Q gi|254781187|r 238 YDIFNIP---LEDWKRYQIDTRTVEGI----------DSGFHEGIISRYGLDSDVARIEILGQFPQQE 292 (367)
Q Consensus 238 ye~~~~~---~~~w~~~~~~~~d~p~~----------~~~~i~~~~~~~gedS~~~r~ev~G~Fp~~~ 292 (367)
|++|.++ .+.|..+.++|++.|.. +.+|.++.++.+ ++..|+||++|+|..++
T Consensus 320 Ydl~~~A~~g~n~f~~~~~~W~~~p~r~~~~~~~~dee~~~~~~~~~~~--s~~~F~QEYeceFlgSs 385 (385)
T 2o0j_A 320 YDIWTAAVEGKSGFEPYTAIWNSVKERLYNDEDIFDDGWQWSIQTINGS--SLAQFRQEHTAAFEGTS 385 (385)
T ss_dssp HHHHHHHHTTCSSCEEEEECGGGSGGGGBCTTSBBCTTHHHHHHHHHTS--CHHHHHHHHSCCCSSCC
T ss_pred HHHHHHHHHCCCCCEEEEECCEECCCCCCCCCCCCHHHHHHHHHHHHCC--CHHHHHHHHCCEECCCC
T ss_conf 9999998708888637861401055520468889807999999987559--99999998498607879