HHsearch results for GI: 254781187 and protein with PDBid: 2o0j_A

>2o0j_A Terminase, DNA packaging protein GP17; nucleotide-binding fold, hydrolase; HET: DNA ADP; 1.80A {Enterobacteria phage T4} PDB: 2o0h_A* 2o0k_A*
Probab=99.98  E-value=9.9e-31  Score=206.04  Aligned_cols=244  Identities=13%  Similarity=0.106  Sum_probs=174.1

Q ss_pred             CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCC---CC-CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf             545723378999975232012598888554301466---88-84436668428999999988887512455555411247
Q gi|254781187|r    5 ISTDQKLEQELHEMLMHAECVLSFKNFVMRFFPWGI---KG-KPLEHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKC   80 (367)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~w~~---~~-~~~~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~   80 (367)
                      -...++|++||.++   .+|..||.+|+.. |.+=+   +| .|+    .|.++|.++++.+.+           .+|++
T Consensus       122 ~~~~~~t~e~~~e~---~kc~~dp~yF~~~-y~~i~~~~~G~ipF----~Lyp~Qkell~~~~~-----------~Rf~I  182 (385)
T 2o0j_A          122 NIKTQWTREMVEEW---KKCRDDIVYFAET-YCAITHIDYGVIKV----QLRDYQRDMLKIMSS-----------KRMTV  182 (385)
T ss_dssp             TCCCCCCHHHHHHH---HHHHHCHHHHHHH-HCEEECSSSCEEEC----CCCHHHHHHHHHHHH-----------SSEEE
T ss_pred             CCCCCCCHHHHHHH---HHHHCCHHHHHHH-EEEEECCCCCEEEC----CCCHHHHHHHHHHHH-----------CCEEE
T ss_conf             98667799999999---9984198999862-37998888985527----776999999999975-----------04789


Q ss_pred             EEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             76148867889999999999997089977999715379999999999999998623121123333210001233322111
Q gi|254781187|r   81 AISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVSKWLSMLPHRHWFEMQSLSLHPSGWYAELLEQ  160 (367)
Q Consensus        81 ~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (367)
                       |.+|||+|||++++++++|+++++++.+++++|++.+|++.+ +..++.+++.+|...           .......+..
T Consensus       183 -vlKsRQ~GKTT~~a~~~L~~Alf~~~~~i~IiA~k~~~A~~i-~~~ik~~~e~lP~~~-----------~~~~~~~~~~  249 (385)
T 2o0j_A          183 -CNLSRQLGKTTVVAIFLAHFVCFNKDKAVGILAHKGSMSAEV-LDRTKQAIELLPDFL-----------QPGIVEWNKG  249 (385)
T ss_dssp             -EEECSSSCHHHHHHHHHHHHHHSSSSCEEEEEESSHHHHHHH-HHHHHHHHHHSCTTT-----------SCCEEEECSS
T ss_pred             -EEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH-HHHHHHHHHHCHHHH-----------HHCCCHHHHH
T ss_conf             -996266872087999999999726677148861537889999-999999986561655-----------3023102223


Q ss_pred             CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCH--HHHHH-HHHHHHCCCCCEEEEEEECCCCCCCHH
Q ss_conf             134577612662101354455652101135862899975455998--89999-898740698825899980789998768
Q gi|254781187|r  161 SMGIDSKHYTITCRTYSEERPDTFVGPHNTHGMAVFNDEASGTPD--IINKS-ILGFFTELNPNRFWIMTSNTRRLNGWF  237 (367)
Q Consensus       161 ~~~~~~~~~~~~a~~~~~~~~ea~~g~h~~~~~l~ivDEAsgI~d--~i~e~-i~g~Lt~~~~~~~~i~igNP~r~~g~F  237 (367)
                      .+...+++.++.+.       .+..+.+|....++++||++++++  .+|.+ +.+++++.+++  ++++|||.+ .|+|
T Consensus       250 ~~~~~ngs~i~~~a-------~s~da~RG~~~~~lilDE~Afi~~~~e~~~~~~~~~~s~~~Gk--iIiiSTPNG-~N~F  319 (385)
T 2o0j_A          250 SIELDNGSSIGAYA-------SSPDAVRGNSFAMIYIEDCAFIPNFHDSWLAIQPVISSGRRSK--IIITTTPNG-LNHF  319 (385)
T ss_dssp             EEEETTSCEEEEEE-------CSHHHHHTSCCSEEEEESGGGSTTHHHHHHHHHHHHHSTTCCE--EEEEECCCS-SSHH
T ss_pred             HCCCCCCCCEEECC-------CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCE--EEEEECCCC-CCHH
T ss_conf             12357863101023-------4556545420254203265410026888875313422489803--999989998-7049


Q ss_pred             HHHHHCC---CCCEEEEEECCCCCCCC----------CHHHHHHHHHHCCCCCCEEEEEEEEEECCCC
Q ss_conf             8754112---23504675233328888----------9889999996216880002688864432778
Q gi|254781187|r  238 YDIFNIP---LEDWKRYQIDTRTVEGI----------DSGFHEGIISRYGLDSDVARIEILGQFPQQE  292 (367)
Q Consensus       238 ye~~~~~---~~~w~~~~~~~~d~p~~----------~~~~i~~~~~~~gedS~~~r~ev~G~Fp~~~  292 (367)
                      |++|.++   .+.|..+.++|++.|..          +.+|.++.++.+  ++..|+||++|+|..++
T Consensus       320 Ydl~~~A~~g~n~f~~~~~~W~~~p~r~~~~~~~~dee~~~~~~~~~~~--s~~~F~QEYeceFlgSs  385 (385)
T 2o0j_A          320 YDIWTAAVEGKSGFEPYTAIWNSVKERLYNDEDIFDDGWQWSIQTINGS--SLAQFRQEHTAAFEGTS  385 (385)
T ss_dssp             HHHHHHHHTTCSSCEEEEECGGGSGGGGBCTTSBBCTTHHHHHHHHHTS--CHHHHHHHHSCCCSSCC
T ss_pred             HHHHHHHHHCCCCCEEEEECCEECCCCCCCCCCCCHHHHHHHHHHHHCC--CHHHHHHHHCCEECCCC
T ss_conf             9999998708888637861401055520468889807999999987559--99999998498607879