HHsearch results for GI: 254781187 and protein with PDBid: 2v1x_A
>2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch repair, nucleotide-binding, DNA-binding, polymorphism, nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens} PDB: 2wwy_A*
Probab=96.37 E-value=0.014 Score=33.48 Aligned_cols=84 Identities=15% Similarity=0.123 Sum_probs=51.1
Q ss_pred HHHHHHHHHCCCCCCC----CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 8888554301466888----443666842899999998888751245555541124776148867889999999999997
Q gi|254781187|r 28 FKNFVMRFFPWGIKGK----PLEHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLIS 103 (367)
Q Consensus 28 ~~~f~~~~~~w~~~~~----~~~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~ 103 (367)
|..|-.--|||-++=. ...+++.+|+.|.+++.++-++- .+.|.++.|.|||.+...-+ +
T Consensus 18 ~~~~~~~~fp~~~~~~~~l~~~fg~~~fRp~Q~eaI~~il~G~------------dvlv~aPTGsGKTL~y~LPa---l- 81 (591)
T 2v1x_A 18 PAAWNKEDFPWSGKVKDILQNVFKLEKFRPLQLETINVTMAGK------------EVFLVMPTGGGKSLCYQLPA---L- 81 (591)
T ss_dssp GGGGCCSCSTTHHHHHHHHHHTSCCCSCCTTHHHHHHHHHTTC------------CEEEECCTTSCTTHHHHHHH---H-
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC------------CEEEECCCCCHHHHHHHHHH---H-
T ss_conf 9775667899879999999984799998989999999998099------------88998389856999999999---9-
Q ss_pred HCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 08997799971537999999999999
Q gi|254781187|r 104 TRPGMSIICIANSETQLKNTLWAEVS 129 (367)
Q Consensus 104 ~~~~~~v~~~A~t~~Q~~~~lw~ei~ 129 (367)
. .+..+++++|+..-+.+.. ..++
T Consensus 82 ~-~~~~tlVIsPl~aL~~qq~-~~l~ 105 (591)
T 2v1x_A 82 C-SDGFTLVICPLISLMEDQL-MVLK 105 (591)
T ss_dssp T-SSSEEEEECSCHHHHHHHH-HHHH
T ss_pred H-CCCCEEEECCHHHHHHHHH-HHHH
T ss_conf 6-7995999968799999999-9999