HHsearch results for GI: 254781187 and protein with PDBid: 2va8_A
>2va8_A SSO2462, SKI2-type helicase; hydrolase, DNA repair, ATP-binding, nucleotide-binding; 2.30A {Sulfolobus solfataricus}
Probab=98.22 E-value=2.6e-06 Score=56.36 Aligned_cols=65 Identities=12% Similarity=0.112 Sum_probs=45.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
Q ss_conf 66684289999999888875124555554112477614886788999999999999708997799971537999999
Q gi|254781187|r 47 HFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNT 123 (367)
Q Consensus 47 ~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~ 123 (367)
++..|++||.+++..+ +.++. .+.|.|+.|+|||.++...++-.+. ..+.++++++|+..=+.++
T Consensus 27 g~~~l~p~Q~~ai~~~---l~~g~--------nvlv~aPTGsGKTl~~~l~il~~l~-~~~~k~l~i~PtraL~~q~ 91 (715)
T 2va8_A 27 GIKKLNPPQTEAVKKG---LLEGN--------RLLLTSPTGSGKTLIAEMGIISFLL-KNGGKAIYVTPLRALTNEK 91 (715)
T ss_dssp SCCBCCHHHHHHHHTT---TTTTC--------CEEEECCTTSCHHHHHHHHHHHHHH-HSCSEEEEECSCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHH---HHCCC--------CEEEECCCCCHHHHHHHHHHHHHHH-HCCCEEEEECCHHHHHHHH
T ss_conf 9999999999999999---96899--------6999829985499999999999998-6799199981889999999