HHsearch results for GI: 254781187 and protein with PDBid: 2vl7_A
>2vl7_A XPD; helicase, unknown function; 2.25A {Sulfolobus tokodaii}
Probab=97.84 E-value=8.6e-05 Score=47.03 Aligned_cols=67 Identities=16% Similarity=0.235 Sum_probs=51.5
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 84289999999888875124555554112477614886788999999999999708997799971537999999999999
Q gi|254781187|r 50 QPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWAEVS 129 (367)
Q Consensus 50 ~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ei~ 129 (367)
.+|++|.+++..|.+.++++. .+.|-|+-|+|||......++- .+.+|+++.+|..|+.+. ..+++
T Consensus 7 ~~R~~Q~~~~~~i~~al~~~~--------~~~ieApTGtGKTla~L~~a~~-----~~~kvii~t~T~~l~~Q~-~~e~~ 72 (540)
T 2vl7_A 7 QLRQWQAEKLGEAINALKHGK--------TLLLNAKPGLGKTVFVEVLGMQ-----LKKKVLIFTRTHSQLDSI-YKNAK 72 (540)
T ss_dssp --CCHHHHHHHHHHHHHHTTC--------EEEEECCTTSCHHHHHHHHHHH-----HTCEEEEEESCHHHHHHH-HHHHG
T ss_pred CCCHHHHHHHHHHHHHHHCCC--------CEEEECCCCHHHHHHHHHHHHH-----HCCCEEEECCCHHHHHHH-HHHHH
T ss_conf 858899999999999994699--------0999928816899999999999-----799199996989999999-99715
Q ss_pred H
Q ss_conf 9
Q gi|254781187|r 130 K 130 (367)
Q Consensus 130 k 130 (367)
+
T Consensus 73 ~ 73 (540)
T 2vl7_A 73 L 73 (540)
T ss_dssp G
T ss_pred C
T ss_conf 6