HHsearch results for GI: 254781187 and protein with PDBid: 2xau_A
>2xau_A PRE-mRNA-splicing factor ATP-dependent RNA helica; hydrolase, ribosome biogenesis, ATPase, ATP-binding, OB-fold; HET: ADP; 1.90A {Saccharomyces cerevisiae} PDB: 3kx2_B*
Probab=96.11 E-value=0.061 Score=29.54 Aligned_cols=161 Identities=15% Similarity=0.068 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH-CCCCEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 8999999988887512455555411247761488678899999999999970-899779997153799999999999999
Q gi|254781187|r 53 RWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLIST-RPGMSIICIANSETQLKNTLWAEVSKW 131 (367)
Q Consensus 53 ~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~-~~~~~v~~~A~t~~Q~~~~lw~ei~k~ 131 (367)
....++|+.|.++. =+.|.+..|+|||+-+--+++..... ..+++|+||-|..--+..+ -..+++-
T Consensus 97 ~~~~~il~~i~~~~------------v~ii~G~TGsGKTTqvPq~ll~~~~~~~~~~~I~~tQPRRiaA~sv-A~RVa~e 163 (773)
T 2xau_A 97 AQRDEFLKLYQNNQ------------IMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSV-AQRVAEE 163 (773)
T ss_dssp GGHHHHHHHHHHCS------------EEEEECCTTSSHHHHHHHHHHHHHCGGGGTCEEEEEESCHHHHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHCC------------EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH-HHHHHHH
T ss_conf 78999999999799------------6999849989888899999998303137998799928978999999-9999998
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE-CCCCCCCCCCCCCCCCCCCCEEEEECCCC--CCHHHH
Q ss_conf 986231211233332100012333221111345776126621-01354455652101135862899975455--998899
Q gi|254781187|r 132 LSMLPHRHWFEMQSLSLHPSGWYAELLEQSMGIDSKHYTITC-RTYSEERPDTFVGPHNTHGMAVFNDEASG--TPDIIN 208 (367)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-~~~~~~~~ea~~g~h~~~~~l~ivDEAsg--I~d~i~ 208 (367)
... ..+ ...++...........+...|.+. ...+....+. .+ .+...+|+||+.- +.-++.
T Consensus 164 ~~~-~lG-----------~~VGY~ir~e~~~s~~T~i~~~T~GiLLr~l~~d~--~L--~~~s~iIlDEvHERs~~tD~l 227 (773)
T 2xau_A 164 MDV-KLG-----------EEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDH--DL--SRYSCIILDEAHERTLATDIL 227 (773)
T ss_dssp TTC-CBT-----------TTEEEEETTEEECCTTCSEEEEEHHHHHHHHHHST--TC--TTEEEEEECSGGGCCHHHHHH
T ss_pred HCC-CCC-----------CEEEEEECCCCCCCCCCEEEEECHHHHHHHHHHCC--CC--CCCCEEEECCCEECCCCHHHH
T ss_conf 499-988-----------85668955787789983699975299999985486--65--675779954520157038999
Q ss_pred -HHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHCC
Q ss_conf -998987406988258999807899987688754112
Q gi|254781187|r 209 -KSILGFFTELNPNRFWIMTSNTRRLNGWFYDIFNIP 244 (367)
Q Consensus 209 -e~i~g~Lt~~~~~~~~i~igNP~r~~g~Fye~~~~~ 244 (367)
-.+.-.+.. ......++. +.|-....|.+.|...
T Consensus 228 l~llk~~~~~-r~~lklIlm-SAT~d~~~f~~yf~~~ 262 (773)
T 2xau_A 228 MGLLKQVVKR-RPDLKIIIM-SATLDAEKFQRYFNDA 262 (773)
T ss_dssp HHHHHHHHHH-CTTCEEEEE-ESCSCCHHHHHHTTSC
T ss_pred HHHHHHHHHH-CCCCEEEEE-CCCCCHHHHHHHCCCC
T ss_conf 9999999985-888479994-1775478887533899