HHsearch results for GI: 254781187 and protein with PDBid: 2z0m_A
>2z0m_A 337AA long hypothetical ATP-dependent RNA helicase DEAD; ATP-binding, hydrolase, nucleotide-binding, RNA binding protein, structural genomics; 1.90A {Sulfolobus tokodaii}
Probab=98.03 E-value=2.3e-05 Score=50.55 Aligned_cols=70 Identities=16% Similarity=0.136 Sum_probs=49.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH
Q ss_conf 66684289999999888875124555554112477614886788999999999999708997799971537999999999
Q gi|254781187|r 47 HFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNTLWA 126 (367)
Q Consensus 47 ~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~lw~ 126 (367)
+|..|++.|.+.+..+-++ . .+.|.|+.|+|||.+...-++ ..+.+++++.|+..-+.+. ..
T Consensus 13 g~~~~~p~Q~~ai~~~l~g----~--------dviv~apTGsGKT~~~~lp~l-----~~~~~~lilvP~~~L~~q~-~~ 74 (337)
T 2z0m_A 13 GFKNFTEVQSKTIPLMLQG----K--------NVVVRAKTGSGKTAAYAIPIL-----ELGMKSLVVTPTRELTRQV-AS 74 (337)
T ss_dssp TCCSCCHHHHHHHHHHHTT----C--------CEEEECCTTSSHHHHHHHHHH-----HHTCCEEEECSSHHHHHHH-HH
T ss_pred CCCCCCHHHHHHHHHHHCC----C--------CEEEECCCCCHHHHHHHHHHH-----HHCCCEEEEECCHHHHHHH-HH
T ss_conf 9999999999999999849----9--------899989999569999999999-----8589889994678998888-88
Q ss_pred HHHHHHHH
Q ss_conf 99999986
Q gi|254781187|r 127 EVSKWLSM 134 (367)
Q Consensus 127 ei~k~~~~ 134 (367)
+++++...
T Consensus 75 ~~~~~~~~ 82 (337)
T 2z0m_A 75 HIRDIGRY 82 (337)
T ss_dssp HHHHHTTT
T ss_pred HHHHHCCC
T ss_conf 77541034