HHsearch results for GI: 254781187 and protein with PDBid: 2zj8_A

>2zj8_A DNA helicase, putative SKI2-type helicase; RECA fold, ATP-binding, hydrolase, nucleotide- binding; 2.00A {Pyrococcus furiosus} PDB: 2zj5_A* 2zj2_A 2zja_A*

Probab=98.18  E-value=3.7e-06  Score=55.40  Aligned_cols=65  Identities=18%  Similarity=0.079  Sum_probs=45.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
Q ss_conf             66684289999999888875124555554112477614886788999999999999708997799971537999999
Q gi|254781187|r   47 HFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRPGMSIICIANSETQLKNT  123 (367)
Q Consensus        47 ~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~~~~v~~~A~t~~Q~~~~  123 (367)
                      +|..|++||.+++...   ...+        ..+.|.++.|+|||.++...++..+.. .+.++++++||..=+.+.
T Consensus        20 g~~~l~~~Q~~ai~~~---~~~g--------~~~lv~aPTGsGKTlva~l~il~~l~~-~~~k~l~i~Pt~aL~~Q~   84 (720)
T 2zj8_A           20 GIESFYPPQAEALKSG---ILEG--------KNALISIPTASGKTLIAEIAMVHRILT-QGGKAVYIVPLKALAEEK   84 (720)
T ss_dssp             TCCBCCHHHHHHHTTT---GGGT--------CEEEEECCGGGCHHHHHHHHHHHHHHH-HCSEEEEECSSGGGHHHH
T ss_pred             CCCCCCHHHHHHHHHH---HHCC--------CCEEEECCCCCHHHHHHHHHHHHHHHH-CCCCEEEECCHHHHHHHH
T ss_conf             9999999999999999---9779--------979998099863999999999999996-799199980889999999