HHsearch results for GI: 254781187 and protein with PDBid: 3fmo_B
>3fmo_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic transport, mRNA export, protein interaction; HET: ADP; 2.51A {Homo sapiens}
Probab=97.64 E-value=0.00029 Score=43.80 Aligned_cols=75 Identities=15% Similarity=0.139 Sum_probs=49.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCC-CCEEEEECCCHHHHHHHH
Q ss_conf 3666842899999998888751245555541124776148867889999999999997089-977999715379999999
Q gi|254781187|r 46 EHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRP-GMSIICIANSETQLKNTL 124 (367)
Q Consensus 46 ~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~-~~~v~~~A~t~~Q~~~~l 124 (367)
.+|..|++-|.+.+-.+-.. .+. .+.|.|+.|+|||.....-++..+...+ +.++++++||..-+..+
T Consensus 110 ~g~~~pt~iQ~~aIp~il~~--~g~--------dviv~a~TGSGKTlaf~lpi~~~~~~~~~~~~alil~PtreLa~qi- 178 (300)
T 3fmo_B 110 MGFNRPSKIQENALPLMLAE--PPQ--------NLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQT- 178 (300)
T ss_dssp TTCCSCCHHHHHHHHHHTSS--SCC--------CEEEECCTTSSHHHHHHHHHHHHCCTTSCSCCEEEECSSHHHHHHH-
T ss_pred CCCCCCCHHHHHHHHHHHHC--CCC--------EEEEECCCCCCHHHHHHCCHHHCCCCCCCCCEEEEEECCHHHHHHH-
T ss_conf 79999999999999999836--897--------2999868998278886220121234346786399993989999999-
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254781187|r 125 WAEVSKW 131 (367)
Q Consensus 125 w~ei~k~ 131 (367)
..+++.+
T Consensus 179 ~~~~~~~ 185 (300)
T 3fmo_B 179 GKVIEQM 185 (300)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
T ss_conf 9998751