HHsearch results for GI: 254781187 and protein with PDBid: 3i5x_A

>3i5x_A ATP-dependent RNA helicase MSS116; protein-RNA complex, RNA helicase, DEAD-BOX, ATP-binding, helicase, hydrolase, mitochondrion; HET: ANP; 1.90A {Saccharomyces cerevisiae} PDB: 3i5y_A* 3i61_A* 3i62_A*
Probab=97.75  E-value=0.00017  Score=45.26  Aligned_cols=79  Identities=16%  Similarity=0.052  Sum_probs=54.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHC-----CCCEEEEECCCHHHH
Q ss_conf             366684289999999888875124555554112477614886788999999999999708-----997799971537999
Q gi|254781187|r   46 EHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTR-----PGMSIICIANSETQL  120 (367)
Q Consensus        46 ~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~-----~~~~v~~~A~t~~Q~  120 (367)
                      .+|..|++-|.+++..+-...    .      .-+.|.|..|+|||.+...-++-.+...     .+.++++++||...+
T Consensus        90 ~gf~~~t~iQ~~ai~~il~g~----~------~dvlv~ApTGSGKTlay~lP~l~~l~~~~~~~~~~~~~lil~PtreLa  159 (563)
T 3i5x_A           90 MEFPGLTPVQQKTIKPILSSE----D------HDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQYMVKAVIVAPTRDLA  159 (563)
T ss_dssp             TCCSSCCHHHHHHHHHHHSSS----S------EEEEEECCTTSCHHHHHHHHHHHHHHHTTTSSTTSCCEEEECSSHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHCCC----C------CCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHH
T ss_conf             699999999999999997699----9------988998899850999999999999984443567884899981559999


Q ss_pred             HHHHHHHHHHHHHHC
Q ss_conf             999999999999862
Q gi|254781187|r  121 KNTLWAEVSKWLSML  135 (367)
Q Consensus       121 ~~~lw~ei~k~~~~~  135 (367)
                      .++ ..+++++....
T Consensus       160 ~Qi-~~~~~~~~~~~  173 (563)
T 3i5x_A          160 LQI-EAEVKKIHDMN  173 (563)
T ss_dssp             HHH-HHHHHHHHHHC
T ss_pred             HHH-HHHHHHHHHHC
T ss_conf             999-99999998632