HHsearch results for GI: 254781187 and protein with PDBid: 3iuy_A
>3iuy_A Probable ATP-dependent RNA helicase DDX53; REC-A-like, DEAD-BOX, structural genomics, structural genomics consortium, SGC, ATP-binding, hydrolase; HET: AMP; 2.40A {Homo sapiens}
Probab=97.76 E-value=0.00013 Score=45.83 Aligned_cols=73 Identities=16% Similarity=0.131 Sum_probs=54.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHC-------CCCEEEEECCCHH
Q ss_conf 366684289999999888875124555554112477614886788999999999999708-------9977999715379
Q gi|254781187|r 46 EHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTR-------PGMSIICIANSET 118 (367)
Q Consensus 46 ~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~-------~~~~v~~~A~t~~ 118 (367)
.+|..|++-|.+++..+-++. .+.|.|..|+|||.....-++..+... .+.++++++||..
T Consensus 38 ~g~~~pt~iQ~~aip~il~g~------------dviv~a~TGsGKTlay~lp~l~~~~~~~~~~~~~~~~~alil~Ptre 105 (228)
T 3iuy_A 38 VGILKPTPIQSQAWPIILQGI------------DLIVVAQTGTGKTLSYLMPGFIHLDSQPISREQRNGPGMLVLTPTRE 105 (228)
T ss_dssp HTCCSCCHHHHHHHHHHHTTC------------CEEEECCTTSCHHHHHHHHHHHHHC---------CCCSEEEECSSHH
T ss_pred CCCCCCCHHHHHHHHHHHCCC------------CEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCEEEEECCCHH
T ss_conf 799999999999999996799------------88998789998636655328998762000000157854999828588
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q gi|254781187|r 119 QLKNTLWAEVSKW 131 (367)
Q Consensus 119 Q~~~~lw~ei~k~ 131 (367)
-+.++. ..+.+.
T Consensus 106 La~qi~-~~~~~l 117 (228)
T 3iuy_A 106 LALHVE-AECSKY 117 (228)
T ss_dssp HHHHHH-HHHHHH
T ss_pred HHHHHH-HHHHHH
T ss_conf 999999-999986