HHsearch results for GI: 254781187 and protein with PDBid: 3llm_A

>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens}
Probab=97.35  E-value=0.0061  Score=35.68  Aligned_cols=64  Identities=19%  Similarity=0.233  Sum_probs=47.6

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCC---CCEEEEECCCH
Q ss_conf             888443666842899999998888751245555541124776148867889999999999997089---97799971537
Q gi|254781187|r   41 KGKPLEHFSQPHRWQLEFMEAVDVHCHSNVNNSNPTIFKCAISAGRGIGKTTLNAWMMLWLISTRP---GMSIICIANSE  117 (367)
Q Consensus        41 ~~~~~~~~~~p~~wq~~~l~~~~~~~~~~~~~~~~~~~~~~v~sgrg~GKS~~~a~~~lw~~~~~~---~~~v~~~A~t~  117 (367)
                      +.+|..      +.+.++|+.|.+|.            -+.|.++.|+|||+.+--+++.......   .++|+||-|..
T Consensus        58 ~~LPi~------~~~~~il~~i~~n~------------vvvV~G~TGsGKSTqiPq~Lle~~~~~~~~~~~~I~~tqPRR  119 (235)
T 3llm_A           58 ELLPVK------KFESEILEAISQNS------------VVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRR  119 (235)
T ss_dssp             HTSGGG------GGHHHHHHHHHHCS------------EEEEECCTTSSHHHHHHHHHHHHHHHTTCGGGCEEEEEESSH
T ss_pred             HHCCCH------HHHHHHHHHHHHCC------------EEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCH
T ss_conf             849916------88999999999799------------799993898999999999999867642788886599963737


Q ss_pred             HHHHH
Q ss_conf             99999
Q gi|254781187|r  118 TQLKN  122 (367)
Q Consensus       118 ~Q~~~  122 (367)
                      --+..
T Consensus       120 ~aa~s  124 (235)
T 3llm_A          120 ISAVS  124 (235)
T ss_dssp             HHHHH
T ss_pred             HHHHH
T ss_conf             99999