HHsearch alignment of GI: 254781188 and MMDB domain: 1pdn_C_17-69
>1pdn_C (C:17-69) Protein (PRD paired); protein-DNA complex, double helix, PAX, paired domain, DNA-binding protein, gene regulation/DNA complex; HET: DNA; 2.50A {Drosophila melanogaster}
Probab=94.74 E-value=0.033 Score=35.46 Aligned_cols=41 Identities=10% Similarity=0.131 Sum_probs=38.4
Q ss_pred CCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCH
Q ss_conf 589999999999858923899961588988889999983398
Q gi|254781188|r 21 YSPELFAGILDQVANGKALGHVLRKVGMPKYSTFYRWIKKDL 62 (185)
Q Consensus 21 Ys~Eiad~Ic~rIA~GeSLr~ICkd~gMPs~sTV~rWL~kde 62 (185)
|+-++-..|++.+.+|.|.+++++..++ |.+|+++|++...
T Consensus 2 yS~DlR~riv~~~~~G~s~~~aA~~f~V-S~~tv~k~~~r~~ 42 (53)
T 1pdn_C 2 LPNNIRLKIVEMAADGIRPCVISRQLRV-SHGCVSKILNRYQ 42 (53)
T ss_dssp CCHHHHHHHHHHHHTTCCHHHHHHHHTC-CHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCCHHHHHHHHCC-CHHHHHHHHHHHH
T ss_conf 9899999999999869999999998896-8999999999987