HHsearch results for GI: 254781188 and protein with PDBid: 1jko_C

>1jko_C HIN recombinase, DNA-invertase HIN; water-mediated recognition, protein-DNA complex, A10G mutant, DNA binding protein/DNA complex; 2.24A {Synthetic} SCOP: a.4.1.2 PDB: 1ijw_C* 1jj6_C* 1jj8_C* 1hcr_A 1jkp_C 1jkq_C 1jkr_C

Probab=96.55  E-value=0.0018  Score=42.86  Aligned_cols=46  Identities=17%  Similarity=0.223  Sum_probs=40.4

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCH
Q ss_conf             246567644589999999999858923899961588988889999983398
Q gi|254781188|r   12 VRAKKGCIYYSPELFAGILDQVANGKALGHVLRKVGMPKYSTFYRWIKKDL   62 (185)
Q Consensus        12 ~R~Kk~~i~Ys~Eiad~Ic~rIA~GeSLr~ICkd~gMPs~sTV~rWL~kde   62 (185)
                      ||.++    .|++-++.+-..+++|+|..+|++..|+ |.+|+|+||-.+.
T Consensus         1 GRp~k----Lt~~q~~~a~~l~~~G~s~~~iA~~~gV-sr~TlYrylp~~~   46 (52)
T 1jko_C            1 GRPRA----INKHEQEQISRLLEKGHPRQQLAIIFGI-GVSTLYRYFPASS   46 (52)
T ss_dssp             CCCCS----SCTTHHHHHHHHHHTTCCHHHHHHTTSC-CHHHHHHHSCTTC
T ss_pred             CCCCC----CCHHHHHHHHHHHHCCCCHHHHHHHHCC-CHHHHHHHCCCHH
T ss_conf             97987----9999999999999978989999999797-9999999851304