HHsearch results for GI: 254781188 and protein with PDBid: 3hef_A
>3hef_A Gene 1 protein; bacteriophage SF6, terminase small subunit GP1, GP1 octameric assembly, GP1 channel, DNA recognition, DNA packaging; 1.65A {Enterobacteria phage SF6}
Probab=99.93 E-value=7.4e-26 Score=192.58 Aligned_cols=121 Identities=29% Similarity=0.471 Sum_probs=105.8
Q ss_pred HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 55540246567644589999999999858923899961588988889999983398999999999997379999998620
Q gi|254781188|r 7 KAKKAVRAKKGCIYYSPELFAGILDQVANGKALGHVLRKVGMPKYSTFYRWIKKDLKLQEAYTEALQCRLDLLAEELLEE 86 (185)
Q Consensus 7 ~~~Ka~R~Kk~~i~Ys~Eiad~Ic~rIA~GeSLr~ICkd~gMPs~sTV~rWL~kdeEfreqYa~Are~qaD~laEEILE~ 86 (185)
+.+|.||+++ ||+|++++||++|++|.|++.||+++||||++|||+|++++++|+++|.+|++.+++.++|++++.
T Consensus 6 ~~~k~GRPtk----~t~e~~e~I~~~l~~G~sl~~i~~~~gvps~sT~~~Wl~~~~ef~e~y~~Ar~~~~~~~~~~~~~i 81 (143)
T 3hef_A 6 TEPKAGRPSD----YMPEVADDICSLLSSGESLLKVCKRPGMPDKSTVFRWLAKHEDFRDKYAKATEARADSIFEEIFEI 81 (143)
T ss_dssp -------CCS----CCHHHHHHHHHHHHTTCCHHHHHTSTTCCCHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCC----CCHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8999999865----799999999999988985999987079996899999997189999999999999999999999999
Q ss_pred CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 0230056403603789979999889999987646653434203443313
Q gi|254781188|r 87 PAPTAEELANPVFYSKMRDRKQRMGTFLLEKLSNQKYGPRVSVESKHTI 135 (185)
Q Consensus 87 ~a~~~ee~~~~~~~~~lr~~~~~~~~w~l~k~~p~~yg~rvs~e~~h~~ 135 (185)
.. ........+..+++++++++ |.|+|++|++||+++.+|++...
T Consensus 82 ~~-~~~~~~~~~~~~r~~~~~~k---w~l~kl~P~~ygdk~~~e~~g~~ 126 (143)
T 3hef_A 82 AD-NAIPDAAEVAKARLRVDTRK---WALARMNPRKYGDKVTNELVGKD 126 (143)
T ss_dssp HH-TCCSSHHHHHHHHHHHHHHH---HHHHHHSHHHHSCCEEEEEECGG
T ss_pred HH-HCCCCHHHHHHHHHHHHHHH---HHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 86-10246188888688899999---99976683013656431036789