HHsearch alignment for GI: 254781190 and conserved domain: pfam08707

>pfam08707 PriCT_2 Primase C terminal 2 (PriCT-2). This alpha helical domain is found at the C terminal of primases.

Probab=99.70  E-value=2.4e-17  Score=119.05  Aligned_cols=60  Identities=33%  Similarity=0.591  Sum_probs=55.0

Q ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
Q ss_conf             99999973580013567457999998763027886226799999861388998678999862079
Q gi|254781190|r  169 EIRAFLSCFGEEFYNGSHDEWIPVVMAIHYETRGSAEGKEIVREWCKLGRTYDEKSFNAKWDSFD  233 (233)
Q Consensus       169 ~a~~~L~~i~~~~~~~dyd~W~~vg~AL~~~~~~~~~~l~lw~~WS~~~~~y~~~~~~~~W~sF~  233 (233)
T Consensus         1 ~~~~~L~~i~~~---~dy~~W~~vG~aL~~~~--~~~~~~lw~~wS~~~~ky~~~~~~~~W~sf~   60 (74)
T pfam08707         1 DAREALDFIPPR---DDYDSWLRVGMALKHEF--GEEGLELWDEWSAKSSKYDPGECERKWDSFK   60 (74)
T ss_pred             CHHHHHHCCCCC---CCHHHHHHHHHHHHHCC--CHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
T ss_conf             988997238986---88899999999998266--6579999999974656588378999998377