HHsearch results for GI: 254781190 and protein with PDBid: 1ro2_A

>1ro2_A Hypothetical protein ORF904; DNA polymerase, primase, replication, polymerization, evolution of nucleic acid polymerizing enzymes; 1.60A {Sulfolobus islandicus} SCOP: d.264.1.2 PDB: 1ro0_A 1rni_A
Probab=99.68  E-value=1.5e-17  Score=119.01  Aligned_cols=105  Identities=9%  Similarity=0.080  Sum_probs=68.7

Q ss_pred             HHHHHCCCCC-CEEEEECCCCCCEEEEEEECCCHHHHHHH---HHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCCCCC
Q ss_conf             3787518616-88997078848889999548984678999---9977640898629867889539998447431243357
Q gi|254781190|r    3 ATDVDHYVYN-GFGILCGIGTHPVYAFDVDVLDEQVVDRF---NNEFQSCCGKPISRVGQAPKTLMLFRMQETNLKKQKS   78 (233)
Q Consensus         3 a~~~~~~p~~-giGi~~G~~s~~l~~iDiD~~d~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~lfr~~~~~~~~~~~   78 (233)
                      ..+++++|.+ ||||+||+ + ++++||||..  .....+   ..+.+.+..+++++++ .++.|+||+.++.+..+...
T Consensus        47 ~~w~~~~p~~~NiGI~tG~-s-glvViDiD~~--~~~~~~~~~~~l~~~~~~T~~v~Tp-sGG~HlYf~~~~~p~~~~~~  121 (216)
T 1ro2_A           47 QRFLKMIEEGYNYAIPGGQ-K-GMVIMDFESK--EKLKAWIGESALEELCRKTLCTNTV-HGGIHIYVLSNDIPPHKINP  121 (216)
T ss_dssp             HHHHHHHHHTCEEEEESSG-G-GEEEEEESCH--HHHHHHHCHHHHHHHHHHSCEEECT-TSCEEEEEECSCCCSSCCCC
T ss_pred             HHHHHHCCCCCEEEEECCC-C-CEEEEECCCC--CHHHHHHHHHHHHHCCCCCEEEECC-CCEEEEEEECCCCCCCCCCC
T ss_conf             9999859975559998178-8-8899978885--2066665556666208886699889-98589999778878554365


Q ss_pred             C--CCCCCCEEEEECCCEEEECCC-----C-CCCCCCEEEEC
Q ss_conf             7--767663589845832895366-----8-88888457421
Q gi|254781190|r   79 E--EKIQGHLEFLAYGQQFVAYNI-----H-PKTQRAYTWSI  112 (233)
Q Consensus        79 ~--~~~~~~iEi~~~g~q~V~~g~-----h-p~Tg~~Y~W~~  112 (233)
                      .  ......||||+.|+|||+|||     | +.++.+|+|.+
T Consensus       122 ~~~~~g~~~iDir~~ggYVVaPgS~i~h~~~~~~~~~~~~~~  163 (216)
T 1ro2_A          122 LFEENGKGIIDLQSYNSYVLGLGSCVNHLHCTTDKCPWKEQN  163 (216)
T ss_dssp             SEESSSSEEEEEECTTCEEECTTCEEEGGGCCSTTCTTTTCS
T ss_pred             CEECCCCCEEEEEECCCEEEECCEECCCCCCCCCCCCCCCCC
T ss_conf             332389844899716988995581035666787777745787