HHsearch results for GI: 254781190 and protein with PDBid: 1ro2_A
>1ro2_A Hypothetical protein ORF904; DNA polymerase, primase, replication, polymerization, evolution of nucleic acid polymerizing enzymes; 1.60A {Sulfolobus islandicus} SCOP: d.264.1.2 PDB: 1ro0_A 1rni_A
Probab=99.68 E-value=1.5e-17 Score=119.01 Aligned_cols=105 Identities=9% Similarity=0.080 Sum_probs=68.7
Q ss_pred HHHHHCCCCC-CEEEEECCCCCCEEEEEEECCCHHHHHHH---HHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCCCCC
Q ss_conf 3787518616-88997078848889999548984678999---9977640898629867889539998447431243357
Q gi|254781190|r 3 ATDVDHYVYN-GFGILCGIGTHPVYAFDVDVLDEQVVDRF---NNEFQSCCGKPISRVGQAPKTLMLFRMQETNLKKQKS 78 (233)
Q Consensus 3 a~~~~~~p~~-giGi~~G~~s~~l~~iDiD~~d~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~lfr~~~~~~~~~~~ 78 (233)
..+++++|.+ ||||+||+ + ++++||||.. .....+ ..+.+.+..+++++++ .++.|+||+.++.+..+...
T Consensus 47 ~~w~~~~p~~~NiGI~tG~-s-glvViDiD~~--~~~~~~~~~~~l~~~~~~T~~v~Tp-sGG~HlYf~~~~~p~~~~~~ 121 (216)
T 1ro2_A 47 QRFLKMIEEGYNYAIPGGQ-K-GMVIMDFESK--EKLKAWIGESALEELCRKTLCTNTV-HGGIHIYVLSNDIPPHKINP 121 (216)
T ss_dssp HHHHHHHHHTCEEEEESSG-G-GEEEEEESCH--HHHHHHHCHHHHHHHHHHSCEEECT-TSCEEEEEECSCCCSSCCCC
T ss_pred HHHHHHCCCCCEEEEECCC-C-CEEEEECCCC--CHHHHHHHHHHHHHCCCCCEEEECC-CCEEEEEEECCCCCCCCCCC
T ss_conf 9999859975559998178-8-8899978885--2066665556666208886699889-98589999778878554365
Q ss_pred C--CCCCCCEEEEECCCEEEECCC-----C-CCCCCCEEEEC
Q ss_conf 7--767663589845832895366-----8-88888457421
Q gi|254781190|r 79 E--EKIQGHLEFLAYGQQFVAYNI-----H-PKTQRAYTWSI 112 (233)
Q Consensus 79 ~--~~~~~~iEi~~~g~q~V~~g~-----h-p~Tg~~Y~W~~ 112 (233)
. ......||||+.|+|||+||| | +.++.+|+|.+
T Consensus 122 ~~~~~g~~~iDir~~ggYVVaPgS~i~h~~~~~~~~~~~~~~ 163 (216)
T 1ro2_A 122 LFEENGKGIIDLQSYNSYVLGLGSCVNHLHCTTDKCPWKEQN 163 (216)
T ss_dssp SEESSSSEEEEEECTTCEEECTTCEEEGGGCCSTTCTTTTCS
T ss_pred CEECCCCCEEEEEECCCEEEECCEECCCCCCCCCCCCCCCCC
T ss_conf 332389844899716988995581035666787777745787