HHsearch results for GI: 254781190 and protein with PDBid: 3h20_A

>3h20_A Replication protein B; primase, nucleotidyltransferase, helix-bundle-domain; 1.99A {Plasmid RSF1010} PDB: 3h25_A
Probab=96.22  E-value=0.012  Score=33.03  Aligned_cols=59  Identities=12%  Similarity=0.088  Sum_probs=37.9

Q ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHH-HHHHHHHHC
Q ss_conf             999997358001356745799999876302788622679999986138899867-899986207
Q gi|254781190|r  170 IRAFLSCFGEEFYNGSHDEWIPVVMAIHYETRGSAEGKEIVREWCKLGRTYDEK-SFNAKWDSF  232 (233)
Q Consensus       170 a~~~L~~i~~~~~~~dyd~W~~vg~AL~~~~~~~~~~l~lw~~WS~~~~~y~~~-~~~~~W~sF  232 (233)
                      ....+.....   +.+|.+|.-+ ++|.+.-.+.+....+..++|...+++++. ...+.|.+|
T Consensus       228 ~~~l~~r~~g---d~S~~D~~~a-~~l~~~G~t~d~ia~Ai~~~sp~~~~~~~~~~~dya~rt~  287 (323)
T 3h20_A          228 MAGLVKRFGD---DLSKCDFIAA-QKLASRGRSAEEIGKAMAEASPALAERKPGHEADYIERTV  287 (323)
T ss_dssp             HHHHHHHCTT---CHHHHHHHHH-HHHHHTTCCHHHHHHHHHHHCHHHHTCC--CHHHHHHHHH
T ss_pred             HHCCHHHHCC---CCHHHHHHHH-HHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf             4310222058---8218799999-9999947999999999986281334357553247999999