HHsearch results for GI: 254781190 and protein with PDBid: 3h20_A
>3h20_A Replication protein B; primase, nucleotidyltransferase, helix-bundle-domain; 1.99A {Plasmid RSF1010} PDB: 3h25_A
Probab=96.22 E-value=0.012 Score=33.03 Aligned_cols=59 Identities=12% Similarity=0.088 Sum_probs=37.9
Q ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHH-HHHHHHHHC
Q ss_conf 999997358001356745799999876302788622679999986138899867-899986207
Q gi|254781190|r 170 IRAFLSCFGEEFYNGSHDEWIPVVMAIHYETRGSAEGKEIVREWCKLGRTYDEK-SFNAKWDSF 232 (233)
Q Consensus 170 a~~~L~~i~~~~~~~dyd~W~~vg~AL~~~~~~~~~~l~lw~~WS~~~~~y~~~-~~~~~W~sF 232 (233)
....+..... +.+|.+|.-+ ++|.+.-.+.+....+..++|...+++++. ...+.|.+|
T Consensus 228 ~~~l~~r~~g---d~S~~D~~~a-~~l~~~G~t~d~ia~Ai~~~sp~~~~~~~~~~~dya~rt~ 287 (323)
T 3h20_A 228 MAGLVKRFGD---DLSKCDFIAA-QKLASRGRSAEEIGKAMAEASPALAERKPGHEADYIERTV 287 (323)
T ss_dssp HHHHHHHCTT---CHHHHHHHHH-HHHHHTTCCHHHHHHHHHHHCHHHHTCC--CHHHHHHHHH
T ss_pred HHCCHHHHCC---CCHHHHHHHH-HHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 4310222058---8218799999-9999947999999999986281334357553247999999