HHsearch alignment for GI: 254781193 and conserved domain: COG3359

Probab=98.24  E-value=3.4e-05  Score=51.99  Aligned_cols=152  Identities=15%  Similarity=0.080  Sum_probs=94.1

Q ss_pred             EEEEEECCCCCCCCCCCCCHHHCCCCEEEEEEEEECCEEEEEE---ECCCCH---HHHHHHHHHHCCCCCEEEEEEH-HH
Q ss_conf             8999814178987000440011279819999999848039999---788810---4379999986388981999730-77
Q gi|254781193|r    3 TLFIDFETRSPIDLTKCGICKYAEDVCVILFAFGFDDHPVELW---DCVHDP---VMPQVLKEALENTDVTIVAHNS-YF   75 (675)
Q Consensus         3 ~i~lD~ET~~~~dl~~~Gl~~y~~~~~i~~i~~a~~~~~v~~~---d~~~~~---~~~~~l~~~L~~~~~~kV~HNa-~F   75 (675)
T Consensus       100 ~~FFDiETT--------GL~~--ag~~I~~~g~a~~~~~~~~Vrq~~lp~p~~E~avle~fl~~~--~~~~lvsfNGkaF  167 (278)
T COG3359         100 VAFFDIETT--------GLDR--AGNTITLVGGARGVDDTMHVRQHFLPAPEEEVAVLENFLHDP--DFNMLVSFNGKAF  167 (278)
T ss_pred             EEEEEEECC--------CCCC--CCCEEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCC--CCCEEEEECCCCC
T ss_conf             589963314--------6688--898599998887357569997512798413568999975389--8455997468326


Q ss_pred             HHHHHHHH--CCCCCCC-CCEEEHHHHHHHHC----CCCCHHHHHHHCCCCCCHHHHHH---HHHHHHCCCCCCCCCCCC
Q ss_conf             49999986--0899884-20331688999867----89996898998299811004379---999862021123433234
Q gi|254781193|r   76 ERTVLKAC--FNLDIPI-HRWICTLVLARSNG----LPSALKAVGEALKLSSQKMEEGK---ELIARFCKGETHECLYDR  145 (675)
Q Consensus        76 D~~~L~~~--~Gi~i~~-~~~~DTmi~A~~l~----~~~sL~~la~~l~l~~~k~~~~k---~l~~~~~k~~~~~~~~~~  145 (675)
T Consensus       168 D~PfikR~v~~~~el~l~~~H~DL~h~~RRlwk~~l~~c~Lk~VEr~LGi~R~edtdG~~~p~lyr~~~~----------  237 (278)
T COG3359         168 DIPFIKRMVRDRLELSLEFGHFDLYHPSRRLWKHLLPRCGLKTVERILGIRREEDTDGYDGPELYRLYRR----------  237 (278)
T ss_pred             CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH----------
T ss_conf             7089999875164447666631221034453120287888136788857550115898501999999987----------


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             678585328999999899899999999630104
Q gi|254781193|r  146 NKPNHREAWRLFGEYCKGDVTVTREIFKRLEPL  178 (675)
Q Consensus       146 ~~~~~~~~~~~~~~Ya~~Dv~~t~~L~~~l~~~  178 (675)
T Consensus       238 --~~dp~ll~~l~~hN~eDvlnL~~i~~h~~~~  268 (278)
T COG3359         238 --YGDPGLLDGLVLHNREDVLNLPTIIKHVSKK  268 (278)
T ss_pred             --CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf             --0987777898870699887599999999999